Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0885 ATGAGATTTCTATAATTTGGCTGCCTTATCTGTAAAGAGGTTATGGCTACTCCTGTGACGACACCCTGTGCACATAATCTTTCTAAGTTATGTTTGGAGTGTGCCTTTGCAGGTAAGTCTTCTGTGAGAGAAACAAGCACGGGCAGAAGATCTCAGCGTACCTCTTCAAAGAATGTGATGAAATGCCCTTGTTGCCCTACTGAAATTTCTGATTTTCTTCAGAACGTTCAGGTCAATACAGAGTTGTTGGGCTTAATTGAATTATTGAAACCCGACGCAGCCGAAGAAATTGGAAAGCGAAGTGAGCATGAAGATCGATCAAAGGTCCCATCGTCTTCTGTGTTCACCATTGTCAACCACGGTGTTGTGCCTACCACTGCTGGATCTGTGTTTCACCTTCACCTGATCTGGTCGACATGGAACAGAGAGAGGGAACAAGACACGATAGCTACACCGGAGACTTTGTGCTGTAAAATATGA 480 0.4417 MRFLXFGCLICKEVMATPVTTPCAHNLSKLCLECAFAGKSSVRETSTGRRSQRTSSKNVMKCPCCPTEISDFLQNVQVNTELLGLIELLKPDAAEEIGKRSEHEDRSKVPSSSVFTIVNHGVVPTTAGSVFHLHLIWSTWNREREQDTIATPETLCCKI 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0885 159 ProSiteProfiles Zinc finger RING-type profile. 8 65 IPR001841 -
Acco09g0885 159 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 6 105 IPR045134 -
Acco09g0885 159 Pfam RING-type zinc-finger 8 63 IPR027370 -
Acco09g0885 159 SUPERFAMILY RING/U-box 6 90 - -
Acco09g0885 159 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 4 116 IPR013083 -
Acco09g0885 159 SMART ring_2 8 65 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0885 Acco-ChrAcco09 17183185 17185851 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0885 6 90 C2H2 Transcription Factor Family AT5G39550 56.471 1.32e-26 102