Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0872 ATGGCTTCTTCTCCTCCTTCTCCTGTTGATTCCCCCACCACTACCCCTCCCGCCGATCCTCCCACCGCCGTCCCTCTTGCGGTTGCTATTCCTCCGCCTTTGCCCTCTTCGCAACAGCCTTCATCTTCCTCTCGCCGCCTTCCGCCGCCGTGTTGGTCTTCTGAGGAGACTGCTGCTTTGATTGATGCGTATCGCGACAAGTGGTATTCTCTTGGCCGGGGTAATCTCAAGGCTACGCATTGGCAGGATGTCGCCGATGCTGTTACCTCCCGCTGCCCAGGCGCGTCGCCGCCCAAAACCGCGGTGCAGTGCCGCCACAAGATGGAGAAGCTCCGGAAGCGGTATCGCACGGAGATCCAACGCGCGCGCAATCTACCTGTTGCGAGGTTCAATTCCTCTTGGGTTCACTTTAAGCGGATGGATGTCATGGAGAAAGGTCCCTCCCCGGTGAAACCTGAGAACGATTCCGATGATAGCCCTGATGAGTTTGATGCCGATGAGGATAATGACTTGTACGAGGAATTCAGAAGCGGTAGTGGGTCCAACACGAGGAGCCTGAACAAGTTGTATCGGAACGGAATGGGCGGAAGCAACGGCAATGGCAGCGGCGGATTTCGGATTCGAATTCCCAATGGGGTAAGTATTGCTCAACCTGGGAATTCCAAATTATATGGGAAATTTTCTGATCAGAAGTATAACTATAACAATAACAACCCCGGTTCAAAATCTGGGCATGGCTTTAATAGCCCCAATTATGAAACTAGGGTTTTGAAAGAGAGAAGTGGATTGGGGAAAAGGGAAAGAGAGAGGGAGAGAGATCCTGTGAGTGAGATGGTGTGTGCAATTAAGGTTCTGGGCGATGGGTTTGTGAAGATGGAGCAGATGAAGATGGAGATGGCCAGGGAGATTGAGAGTATGCGAATGGAGATGGAGATGAAGCGAACTGAGATGATTCTGGAGTCGCAGCAGAGGATCGTGGAGGCATTTGCTAAAGCAGTTTCAGAGAAGAAGGCAAAGAGAATGGCTTCATCACCTTCAGAATCGTAG 1047 0.5186 MASSPPSPVDSPTTTPPADPPTAVPLAVAIPPPLPSSQQPSSSSRRLPPPCWSSEETAALIDAYRDKWYSLGRGNLKATHWQDVADAVTSRCPGASPPKTAVQCRHKMEKLRKRYRTEIQRARNLPVARFNSSWVHFKRMDVMEKGPSPVKPENDSDDSPDEFDADEDNDLYEEFRSGSGSNTRSLNKLYRNGMGGSNGNGSGGFRIRIPNGVSIAQPGNSKLYGKFSDQKYNYNNNNPGSKSGHGFNSPNYETRVLKERSGLGKRERERERDPVSEMVCAIKVLGDGFVKMEQMKMEMAREIESMRMEMEMKRTEMILESQQRIVEAFAKAVSEKKAKRMASSPSES 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0872 348 Coils Coil 105 125 - -
Acco09g0872 348 Gene3D - 52 117 - -
Acco09g0872 348 ProSiteProfiles Myb-like domain profile. 52 112 IPR001005 -
Acco09g0872 348 Coils Coil 296 316 - -
Acco09g0872 348 SMART 118neu2 59 148 IPR006578 -
Acco09g0872 348 MobiDBLite consensus disorder prediction 1 52 - -
Acco09g0872 348 FunFam Trihelix transcription factor ASIL2 52 117 - -
Acco09g0872 348 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 31 335 IPR044823 -
Acco09g0872 348 MobiDBLite consensus disorder prediction 1 38 - -
Acco09g0872 348 MobiDBLite consensus disorder prediction 144 166 - -
Acco09g0872 348 Pfam Myb/SANT-like DNA-binding domain 50 142 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0872 Acco-ChrAcco09 16906471 16907517 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0872 11 143 Trihelix Transcription Factor Family AT3G14180 35.971 4.59e-19 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Acco09g0872 Myb_DNA-bind_4 1.2e-20 CL0123