Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0871 ATGCCTTCTTCTTCTTCAACTTGGTTCACTTCCCTCTCATGTTCTTCCCCAGTAAAACAAGCCGAAGGTGGTAGCTTTGTTTCAACTCTAGCTCAATGGCTCGAGTTTGTCTTTCTCTCTCCATGTCCTCAGAGAGCTCTCTTGACCGCCATTGATGTTGTGCTCATCTTCGTTCTCTTCATGCTCGCCGCCAAGAAGCTCTGTTCTAGGCTCACCTCAAATGGGGACGACCACCCAGCTGCAGCATCTGAACTCGACAAGCCCCTTATCGGAAGACATAACAGAGATTTCATCAGAACAACAACGTGGTTTAAGCTTACTCTAGTTGTGACTGTTGTTTTGACCGTTTTGTACGCTGTTGGGAGTGTTCTGGGATTTGTCAGAGACGCACGAATCGATGGATTGTTTTGGTTAGTTGAAGCAGTGACTTATGGGATTCTCACAATCTTAATCATTCATGAAAAGAGATTTCAAGCTGTTTCTCACCCTCTTCCACTTCGAATCTTCTGGATATTAAACTTCGTTATGTCATGTTTGTTCGTGGTTTCTGGTGTTGTTCGTTTGGTCTCTTCGGAAGAAACTGATAAAGGAGGAGGCTTTGACTTAAGGAATGATGATACTATCGGTTTCATTTCTTTCCCTCTTTCTCTGTTTCTCTTCCTTGCCGCCATTAAAGGATCTACTGGTATCACCTTCACAACTCAGGAAACTGAATCTCTGATTGTTGATTGGGAAACTGTTATTAAATCAAACGTGACTGGTTTTGCCTCAGCTTCTTTAGCTTCCAAGGCCTTTTGGCTATGGATAAATCCATTATTGAGTAAAGGTTACAAGTCACCTTTGAAGATTGATGAAGTCCCATCACTTTCACCAGAGCATAGAGCTGAAAGAATGTCAGTTTTGTTTGAGCAGAAATGGCCTAAGCCACAAGAAAGGTCCAAGCATCCTGTTCTAACCACACTTCTTAGATGCTTCTGGAAGGAAGTAGCTTTTACTGCTTTCCTCGCTGTTGTTCGTCTTAGTGTTATGTTCATAGGTCCTGTTCTTATCCAAAGCTTTGTGGATTTCACATCTGGTAAGAGAAGCTCTGTTTATGAAGGATACTACCTGGTTTTAATCCTCCTGGTTGCGAAGTTCATAGAAGTTTTAGCCACTCATCATTTCAACTTCAACTCTCAGAAGCTAGGAATGCTTATTAGATGCTCTCTTATTACCTCGTTGTACAAGAAAGGGTTAAGGTTGTCTTGTTCTGCAAGACAAGACCATGGGATTGGAACTATAGTTAATTATATGGCTGTGGATGCTCAACAGCTTTCTGATATGATGCTGCAGCTTCATGCTGTGTGGATGATGCCATTTCAAGTTGGGATTGCCTTAGTTCTGCTTTATAAGTACTTGGGCGCCGCGGTGGTCACGGCTTTGCTCGGAATTGTGGGAGTTCTTGTGTTTGTCATATTTGGTACTCGAAGGAACAATCGTTTCCAGTTCAATGTGATGAAGAATCGCGATTCGAGGATGAAGGCTGTTAATGAGATGCTGAATTACATGAGGGTGATCAAGTTCCAAGCTTGGGAAGAGCATTTCAATAAGAGGATTATGGGTTTTCGTGAGTCGGAATTCAGCTGGCTTTCCAAGTTTTTGTATTCAATTTCTGGGAACATCATTGTGATGTGGAGCACACCACTTTTAATATCAACTCTAACCTTTGGGACAGCGATTTTGCTCGGAGTTCCCCTCGATGCAGGCACGGTTTTCACCACAACAACGATCTTTAAGATATTGCAGGAACCTATTAGGACTTTCCCACAATCAATGATCTCTCTTTCACAAGCCATGATATCACTTGGGAGGTTGGATAGGTTCATGATGAGCAAGGAATTGTCTGATTACTCTGTAGAGAGGGAGGAAGGCTGCGATGGACAGACGGCGGTAGAGGTGAAAGATGGGACCTTTAGCTGGGATGATGATGATACTAAGAGGGATTATGACTTGAAAAATATTAATGTCGATATAAAGAAGGGCGATCTCACCGCCATCGTTGGCACTGTCGGCTCTGGGAAATCTTCTCTTCTGGCATCAATTCTTGGTGAGATGCACAAAGTTTTCGGCAAGGTTAGGGTTTGTGGGAGTACGGCGTATGTAGCTCAAACATCATGGATTCAAAATGGGACAATTCAGGATAACATCTTGTATGGATTACCAATGGACAGACACAAGTACAATGAAGTTGTGAGAGTCTGTTGCTTGGACAAAGACTTGGAAATGATGGATGATGGCGATCAAACGGAGATCGGAGAGCGCGGCATCAACCTTAGTGGAGGGCAGAAGCAGAGAATACAACTTGCTAGGGCTGTGTATCAGGACTGTGATATCTATCTTCTTGATGACGTCTTTAGCGCCGTTGATGCTCATACCGGCTCGGCAATATTCAAGGAATGTGTTAGGGGAGCTCTAAAAGGCAAGACTGTTATTCTCGTAACACACCAAGTAGACTTCTTGCACAATGTTGATCTTATAATGGTGATGAGAGATGGAATGATAGTTGAATCTGGGAAGTATAATGATTTAGTAAATTCTGGAATGGATTTTGGAGATCTGGTAGCAGCACACGAGACTTCTATGGAACTTGTAGAACAAGGCAAAGAAATGCCTGGTGAAAATTCCCCAAGAACGTCCAAATCTCCGAGATCTCCGAAGCCGGCTTCTAGTTTCAGAGAGGCCAATGGTGAAAGCAATTCTGTTGATCAAACAAAAGCTGGCAAGGAAAATTCTAAACTCATCAAAGATGAAGAGAGGGAAACTGGGAAAGTGAGCCTGCATATTTATAAGTTGTATTGTACTGAGGCTTATGGATGGTGGGGCATTGCAGGAGTAATTCTTATTTCTCTGTTATGGCAAGGAGCTTTGATGGCTGGTGATTATTGGCTAGCATATGAAACCTCTGAAGAGCAAGCTCGAGTCTTTAACCCGTCTCTTTTTATCTCCATCTACGCGGCTATCGCTGCGGTTTCGGTTGTTTTGGTGATTATAAGATCTTTCTCTGTCACCATCTTGGGGCTTAAGACAGCACAGATTTTCTTCTCCCAGATTCTTAATAGCATCCTTCATGCACCCATGTCTTTCTTCGATACCACGCCTTCCGGAAGAGTTTTAAGTAGGGCATCCACTGATCAGACCAATGTTGATGTGTTTCTCCCATTTTTTGTGGGCATTGTGATTTCCATGTACATCACAGTGCTTAGCATCTTCATTGTTACATGTCAAAACTCTTGGCCAACAGTTTTCTTGCTGATACCTCTGATTTGGTTGAACATATGGTACCGGGGTTATTTCCTCTCTTCATCTCGCGAATTGACTCGCCTGGATTCGATAACAAAAGCACCTGTTATTCACCACTTCTCAGAGAGCATTTCAGGGGTCATGACAATCCGCGCATTCAGAAAGCAGAAGAACTTTTGTGATGAAAACGTTAAACGAGTTAACGAAAATCTGCGAATGGATTTCCACAACAATGGCTCCAATGAGTGGTTGGGTTTTCGCTTAGAATCACTCGGGAGCTTGGTCTTTTGTATTTCTACTATGTTCATGATTATATTACCCAGCAATATCATAAAGCCAGAAAACGTTGGCTTATCTCTCTCTTATGGCTTGTCTCTAAATGCTGTGTTGTTCTGGGCCATCTACATGAGTTGTTTCATTGAGAACAGAATGGTATCTGTGGAGAGGATTAAGCAATTCACAAAGATTCCATCAGAAGCAGCATGGCATATTAAAGATCGCCTACCTCCCCCGAATTGGCCCGCCCACGGCAATGTTGATATCAGAGGGTTGCAGGTCAGGTATCGTCCCAACACTCCTTTGGTTCTCAAAGGCATCACATTGAGCATTAGTGGTGGAGAGAAGGTTGGTGTTGTGGGAAGAACAGGAAGTGGGAAATCTACTTTGATCCAAGTTTTCTTCAGGCTTGTGGAACCTTCAGGAGGAAGAATAATCATCGATGACATCGACATAACTGCATTAGGCCTTCACGACCTCAGGTCTCGATTCGGTATCATTCCCCAGGAGCCTGTTCTTTTTGAAGGCACTGTTAGGAGCAATATTGATCCAACTGAACAATATTCAGATGAAGAAATATGGAAGAGTTTGGAACGCTGTCAACTAAAAGATGCCGTGGCTTCCAAGCCGGAGAAACTGGATTCTTTAGTGGTTGATAATGGAGAGAATTGGAGTGTGGGACAGAGGCAGTTGTTGTGTTTGGGGAGGGTTATGCTAAAGCGAAGCCGCCTCTTGTTCTTGGATGAAGCAACGGCTTCTGTGGATTCACAAACTGATGCTGTGATTCAGAAAATCATCAGAGAAGACTTTGCAGCTTGTACCATAATCAGCATTGCTCACAGAATACCAACAGTCATGGACTGTGACAGGGTTCTCGTCATAGATGCAGGGAGAGCAAAAGAATTTGATAAACCCTCCAAGTTGCTTCAGAGGCCATCATTATTTGGGGCATTAGTTCAAGAATATGCCAACCGATCCTCAGAGCTCTAA 4545 0.4321 MPSSSSTWFTSLSCSSPVKQAEGGSFVSTLAQWLEFVFLSPCPQRALLTAIDVVLIFVLFMLAAKKLCSRLTSNGDDHPAAASELDKPLIGRHNRDFIRTTTWFKLTLVVTVVLTVLYAVGSVLGFVRDARIDGLFWLVEAVTYGILTILIIHEKRFQAVSHPLPLRIFWILNFVMSCLFVVSGVVRLVSSEETDKGGGFDLRNDDTIGFISFPLSLFLFLAAIKGSTGITFTTQETESLIVDWETVIKSNVTGFASASLASKAFWLWINPLLSKGYKSPLKIDEVPSLSPEHRAERMSVLFEQKWPKPQERSKHPVLTTLLRCFWKEVAFTAFLAVVRLSVMFIGPVLIQSFVDFTSGKRSSVYEGYYLVLILLVAKFIEVLATHHFNFNSQKLGMLIRCSLITSLYKKGLRLSCSARQDHGIGTIVNYMAVDAQQLSDMMLQLHAVWMMPFQVGIALVLLYKYLGAAVVTALLGIVGVLVFVIFGTRRNNRFQFNVMKNRDSRMKAVNEMLNYMRVIKFQAWEEHFNKRIMGFRESEFSWLSKFLYSISGNIIVMWSTPLLISTLTFGTAILLGVPLDAGTVFTTTTIFKILQEPIRTFPQSMISLSQAMISLGRLDRFMMSKELSDYSVEREEGCDGQTAVEVKDGTFSWDDDDTKRDYDLKNINVDIKKGDLTAIVGTVGSGKSSLLASILGEMHKVFGKVRVCGSTAYVAQTSWIQNGTIQDNILYGLPMDRHKYNEVVRVCCLDKDLEMMDDGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSAIFKECVRGALKGKTVILVTHQVDFLHNVDLIMVMRDGMIVESGKYNDLVNSGMDFGDLVAAHETSMELVEQGKEMPGENSPRTSKSPRSPKPASSFREANGESNSVDQTKAGKENSKLIKDEERETGKVSLHIYKLYCTEAYGWWGIAGVILISLLWQGALMAGDYWLAYETSEEQARVFNPSLFISIYAAIAAVSVVLVIIRSFSVTILGLKTAQIFFSQILNSILHAPMSFFDTTPSGRVLSRASTDQTNVDVFLPFFVGIVISMYITVLSIFIVTCQNSWPTVFLLIPLIWLNIWYRGYFLSSSRELTRLDSITKAPVIHHFSESISGVMTIRAFRKQKNFCDENVKRVNENLRMDFHNNGSNEWLGFRLESLGSLVFCISTMFMIILPSNIIKPENVGLSLSYGLSLNAVLFWAIYMSCFIENRMVSVERIKQFTKIPSEAAWHIKDRLPPPNWPAHGNVDIRGLQVRYRPNTPLVLKGITLSISGGEKVGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDDIDITALGLHDLRSRFGIIPQEPVLFEGTVRSNIDPTEQYSDEEIWKSLERCQLKDAVASKPEKLDSLVVDNGENWSVGQRQLLCLGRVMLKRSRLLFLDEATASVDSQTDAVIQKIIREDFAACTIISIAHRIPTVMDCDRVLVIDAGRAKEFDKPSKLLQRPSLFGALVQEYANRSSEL 1514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0871 1514 CDD ABCC_MRP_domain1 644 845 - -
Acco09g0871 1514 CDD ABCC_MRP_domain2 1270 1490 - -
Acco09g0871 1514 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 644 869 IPR003439 GO:0005524
Acco09g0871 1514 Pfam ABC transporter transmembrane region 331 597 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco09g0871 1514 Pfam ABC transporter transmembrane region 988 1208 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco09g0871 1514 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1264 1505 IPR027417 -
Acco09g0871 1514 SUPERFAMILY ABC transporter transmembrane region 312 622 IPR036640 GO:0005524|GO:0016020
Acco09g0871 1514 CDD ABC_6TM_ABCC_D2 955 1247 IPR044726 GO:0140359
Acco09g0871 1514 Pfam ABC transporter 1289 1437 IPR003439 GO:0005524
Acco09g0871 1514 ProSitePatterns ABC transporters family signature. 771 785 IPR017871 GO:0005524|GO:0016887
Acco09g0871 1514 Gene3D ABC transporter type 1, transmembrane domain 312 619 IPR036640 GO:0005524|GO:0016020
Acco09g0871 1514 CDD ABC_6TM_ABCC_D1 331 618 IPR044746 GO:0140359
Acco09g0871 1514 FunFam ABC transporter C family member 4 627 888 - -
Acco09g0871 1514 Pfam ABC transporter 664 797 IPR003439 GO:0005524
Acco09g0871 1514 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 641 867 IPR027417 -
Acco09g0871 1514 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 330 610 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco09g0871 1514 Gene3D ABC transporter type 1, transmembrane domain 917 1253 IPR036640 GO:0005524|GO:0016020
Acco09g0871 1514 SMART AAA_5 673 854 IPR003593 GO:0016887
Acco09g0871 1514 SMART AAA_5 1298 1491 IPR003593 GO:0016887
Acco09g0871 1514 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 256 1508 - -
Acco09g0871 1514 MobiDBLite consensus disorder prediction 877 927 - -
Acco09g0871 1514 FunFam ABC transporter C family member 10 313 626 - -
Acco09g0871 1514 Gene3D - 1256 1504 IPR027417 -
Acco09g0871 1514 SUPERFAMILY ABC transporter transmembrane region 952 1252 IPR036640 GO:0005524|GO:0016020
Acco09g0871 1514 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 956 1235 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco09g0871 1514 FunFam ABC transporter C family member 5 918 1253 - -
Acco09g0871 1514 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1274 1506 IPR003439 GO:0005524
Acco09g0871 1514 MobiDBLite consensus disorder prediction 885 920 - -
Acco09g0871 1514 FunFam ABC transporter C family member 3 1255 1506 - -
Acco09g0871 1514 Gene3D - 620 890 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0871 Acco-ChrAcco09 16888608 16895058 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0871 644 862 Calmodulin-binding Proteins AT2G36910 30.932 1.12e-22 103