Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0860 ATGTATGGTGGTGACGAAGTATCGGCAATTGTCATTGACTTGGGCTCACACACTTGCAAAGCCGGTTACGCCGGCGAAGATGCTCCCAAGGCCGTGTTCCCCTCCGTTGTTGGAGCAATCGATCACATGGACATTGATGAACCTGATAATAATGCTGAAAAGAACTCTGCTTCTTCTGCGGATTCAAAAAACAATACCAGAAATCCCGATTCTGACAAAACCAAAGGAAAGCGGAAATTGTATGTGGGATCACAGTCCTTGGGATACCGCAGAGACCATATGGAGGTGCTGTCACCATTGAAAGATGGAATTGTTGCTGACTGGGATATTGTTGATAGCATATGGGACCATGCTTTCAGGGAATGCCTTTTGATTGATCCTAAAGAGCATCCGATGCTACTTGCAGAACCTTCTTCTAACACTCAACAACAGAGAGAAAGGACAGCAGAACTGATGTTTGAAAAGTACAAAGTACCTGCTTTGTTTTTGGCCAAGAATGCTGTTCTTACATCTTTTGCATCAGGGCGTGCCACAGCATTAGTTGTTGATGGAGGTGGAGGATCAACTACTGTTGCACCTGTCCATGACGGTTATGTTCTTCAAAAGGCAGTTGCAACTTCTCCTATTGGAGGAGAGTTTCTTACGGATTGCTTGATGAAAAGTTTGGAAAGTAAAGGTATTATGATAAAACCCCGATATTCCTTCAAGAGAAAGGAAATCCGGCCTGGAGAGTTTCAGACTGTAGATATTGATTTTCCCAATACAACTGAAAGCTACAAACTTTACTCCCAGAGGGTGATTGCTAGTGATATCAAGGAATGTGTGTGCCGAGCTCCTGATACTCCATATGATGAGAGTGCATACTCAAACATTCCGATGACCTCGTTTGAACTTCCTGATGGCCAGACAATTGAAATTGGAGCTGATAGATTCAAGACTCCAGATGTTCTTTTTAATCCATCCCTGGTTCAGACTATTCCTGGCATGGAGAGTTTCGCAGAGATGTCTTCTTCAGTTCGAGGTCTGCCCCAGATGGTTATAGAGAGTATTAATAAGTGTGATGTAGACATCCGAAGAGAATTATTTAGCAGCATACTGCTTGCTGGTGGTACTGCTTCAATGCAACAATTGAAGGAACGCCTTGAGAAAGACTTGTTAGAGGAATCCCCTCAAGCTGCTAGAGTAAAAGTGCTGGCCAGTGGAAATGCAACTGAAAGAAGGTTCAGCGTTTGGATAGGTGGAAGCATATTGGCTTCTCTTGGCTCCTTCCAGCAAATGTGGTTCTCCAAGTCTGAGTATGAAGAGCATGGAGCTTCTTATATACAGAGAAAATGCCCATGA 1341 0.437 MYGGDEVSAIVIDLGSHTCKAGYAGEDAPKAVFPSVVGAIDHMDIDEPDNNAEKNSASSADSKNNTRNPDSDKTKGKRKLYVGSQSLGYRRDHMEVLSPLKDGIVADWDIVDSIWDHAFRECLLIDPKEHPMLLAEPSSNTQQQRERTAELMFEKYKVPALFLAKNAVLTSFASGRATALVVDGGGGSTTVAPVHDGYVLQKAVATSPIGGEFLTDCLMKSLESKGIMIKPRYSFKRKEIRPGEFQTVDIDFPNTTESYKLYSQRVIASDIKECVCRAPDTPYDESAYSNIPMTSFELPDGQTIEIGADRFKTPDVLFNPSLVQTIPGMESFAEMSSSVRGLPQMVIESINKCDVDIRRELFSSILLAGGTASMQQLKERLEKDLLEESPQAARVKVLASGNATERRFSVWIGGSILASLGSFQQMWFSKSEYEEHGASYIQRKCP 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0860 446 Gene3D - 1 184 - -
Acco09g0860 446 FunFam Actin-related protein 4 1 184 - -
Acco09g0860 446 Gene3D - 390 446 - -
Acco09g0860 446 PANTHER ACTIN 9 439 IPR004000 -
Acco09g0860 446 MobiDBLite consensus disorder prediction 43 77 - -
Acco09g0860 446 Gene3D - 185 385 - -
Acco09g0860 446 SUPERFAMILY Actin-like ATPase domain 175 445 IPR043129 -
Acco09g0860 446 SUPERFAMILY Actin-like ATPase domain 5 182 IPR043129 -
Acco09g0860 446 Gene3D Actin; Chain A, domain 4 211 324 - -
Acco09g0860 446 FunFam actin-related protein 4 388 446 - -
Acco09g0860 446 Pfam Actin 4 445 IPR004000 -
Acco09g0860 446 CDD NBD_sugar-kinase_HSP70_actin 98 205 - -
Acco09g0860 446 SMART actin_3 7 446 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0860 Acco-ChrAcco09 16604917 16617653 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0860 1 445 Cytoskeleton Gene Families AT5G09810 36.607 4.21e-94 287