Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0805 ATGGTGTTTCTGAGTTCTTCTCTGCTGATAATCCTCTTCGTCTCGCCTTTGACTTTACTGTGTTCATCATCTTCCTGGAATAATTTGTTATCTTTATCTGTGGGGAATCCAGAACATGTTATCAAATCAAGAAACAACAATTTCACCGCTGGGTTCTATGATGTTGGTGAGAATGCTTTCGCTTTCGCCATTTGGTTCACTAAACTAGATCAAGGCCAAAACTTGACTCCTATTTGGATGGCAAATCGTGAAGTTCTAGTGAACGGAAAAGGTTCAACTCTTACCCTTCGGAGAACTGGAAATCTGGTTTTGACCGATGCGGGTCGGGTCGATGTTTGGGATACCAACACAACTTCATTGAAACCTCCACAATTGATTCTTAAAGATGATGGTAATCTCGTTCTTCTTGAACCTCCTAATCATGTTTTGTGGCAAAGTTTCGATTATCCCACAGACACACTTGTCCCTGGACAGAAGCTAACCAAACATGCTACACTTGTCTCCTCCATAAGTTTTACTAAACCCTCTTCTGGTTTTTATAAGTTCTTCTTTGACAATGATAATTTTCTGTGTCTTGTCTACGAAGGCCCTAATGGTATTTCAAGTGCATATTGGCCACTTCAATGGCCTAGCGCCGAAGTTGGAAGGTCAACGAATTACACGAGTCGTTTTGCGTTTCTTGATTCATTTGGGGATTTCATTTCAACTGATCACTTTACTTTCACAACATCAGATCATGGGCTTGTGCTTCAAAGAAGATTGACCCTTGATAGTGATGGTAATATGAGAGTGTACAGCCGAAGAACCTGGAAAGATCAATGGTATGTTTCATGGGAAGCTTTTTCTGCAGGTTGTAACATTCATGGTGTCTGTGGAGAGAATAGTTTCTGCACATATCTTCCTTATTCTGGTCGAAAATGCTCATGTCTTCCTGGTTATAGATTCAAAGATGAAACTGATTGGTCTCTTGGGTGTCTGCCTGAATTCCATTTGCCTTGTAATCGACCAGAAGAATCTCGCTTTTTGATAATACACAAAGGAAATTTCTTTCGCTATGACCTTGGAACTTTCCCAAACTTTACCTATGATCAATGTAAGGATCTGTGTTTGAATTTTTGTAACTGCAAAGGTTTCCAATATACCTTTGATGGTTCCAAATTTACATGTTACCCAAAGTACGTTTTGGTCAACGGAAACCTTCCTTCTACTTTTGATACTGACTTTTTCCTGAAACTTCCCAAGTCCAGCTCATTTGAATTCACTCATAAATTTTCCCACACCGAATGTGAAAATGTTAAATCTGTAAAGCTTGGGAGACAGGATAGTGCTTTGTTAATGGTGCTTAGATGGATAGCGTTAGCAGTTGGAGGCTTTGAAGTTGTGTTCATCTTCTTTGTTTGGTGTCTAACACGGAAAAACTCTAGCAATAAACAACATAGTTATGAATATCTCACTGTAAACGGGTTTAGAAAATATAGCTACTCAGAGTTGAAAGAAGCAACAAGAGGTTTCAGAGAAGAGATTGGAAGGGGTGCGGGAGGAATCGTATATAAGGGTGCGCTAAAAGATGGGCGAGTAGCAGCAATCAAGAGACTCAACGAAGCAAACCAAGTAGAAAGTGAGTTTCTTGCAGAGGTCAACATGATAGGGAGGCTTAACCACATGAACTTGATTAGCATGTGGGGCTATGGAATTGTGCTGTTGGAGATGATGACAGGAAAAAGCTTGAGGGTCGATGGACCAGACTACTTGCATCATGGGAGGTTAGTGACATGGGTGAGAGACAAGAAAAAGAAAGGAAAAGAAAAGGGGGTATCATCGTGGGTTGAACAAATCGTTGATCCATCGGTTGAGGGAAGTTTTGACAAGAAGACGATGGAGATTCTGTTGACAATGGCATTAGAGTGTGTTGAGGAAGACAGGGAAGCAAGGCCGACAATGAGACGCGTAGTGGAGATGCTTCAAGATCATGATGTTGACTAG 1983 0.4085 MVFLSSSLLIILFVSPLTLLCSSSSWNNLLSLSVGNPEHVIKSRNNNFTAGFYDVGENAFAFAIWFTKLDQGQNLTPIWMANREVLVNGKGSTLTLRRTGNLVLTDAGRVDVWDTNTTSLKPPQLILKDDGNLVLLEPPNHVLWQSFDYPTDTLVPGQKLTKHATLVSSISFTKPSSGFYKFFFDNDNFLCLVYEGPNGISSAYWPLQWPSAEVGRSTNYTSRFAFLDSFGDFISTDHFTFTTSDHGLVLQRRLTLDSDGNMRVYSRRTWKDQWYVSWEAFSAGCNIHGVCGENSFCTYLPYSGRKCSCLPGYRFKDETDWSLGCLPEFHLPCNRPEESRFLIIHKGNFFRYDLGTFPNFTYDQCKDLCLNFCNCKGFQYTFDGSKFTCYPKYVLVNGNLPSTFDTDFFLKLPKSSSFEFTHKFSHTECENVKSVKLGRQDSALLMVLRWIALAVGGFEVVFIFFVWCLTRKNSSNKQHSYEYLTVNGFRKYSYSELKEATRGFREEIGRGAGGIVYKGALKDGRVAAIKRLNEANQVESEFLAEVNMIGRLNHMNLISMWGYGIVLLEMMTGKSLRVDGPDYLHHGRLVTWVRDKKKKGKEKGVSSWVEQIVDPSVEGSFDKKTMEILLTMALECVEEDREARPTMRRVVEMLQDHDVD 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0805 660 Gene3D - 27 148 IPR036426 -
Acco09g0805 660 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 206 IPR036426 -
Acco09g0805 660 ProSiteProfiles Protein kinase domain profile. 502 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0805 660 Gene3D Transferase(Phosphotransferase) domain 1 486 559 - -
Acco09g0805 660 CDD PAN_AP_plant 329 413 - -
Acco09g0805 660 SUPERFAMILY Protein kinase-like (PK-like) 560 656 IPR011009 -
Acco09g0805 660 ProSiteProfiles PAN/Apple domain profile. 333 413 IPR003609 -
Acco09g0805 660 Gene3D - 149 278 IPR036426 -
Acco09g0805 660 PANTHER OS07G0415500 PROTEIN 563 656 - -
Acco09g0805 660 Pfam D-mannose binding lectin 76 163 IPR001480 -
Acco09g0805 660 Gene3D Transferase(Phosphotransferase) domain 1 560 659 - -
Acco09g0805 660 SMART blect_4 32 150 IPR001480 -
Acco09g0805 660 SUPERFAMILY Protein kinase-like (PK-like) 477 563 IPR011009 -
Acco09g0805 660 ProSitePatterns Protein kinases ATP-binding region signature. 508 530 IPR017441 GO:0005524
Acco09g0805 660 CDD B_lectin 43 150 IPR001480 -
Acco09g0805 660 Pfam S-locus glycoprotein domain 235 315 IPR000858 GO:0048544
Acco09g0805 660 Pfam Protein tyrosine and serine/threonine kinase 505 609 IPR001245 GO:0004672|GO:0006468
Acco09g0805 660 ProSiteProfiles Bulb-type lectin domain profile. 17 148 IPR001480 -
Acco09g0805 660 FunFam S-receptor-like serine/threonine-protein kinase 470 566 - -
Acco09g0805 660 SMART tyrkin_6 504 654 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0805 Acco-ChrAcco09 14781715 14784075 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0805 488 585 Receptor kinase-like Gene Family AT3G19300 39.048 8.95e-16 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Acco09g0805 PK_Tyr_Ser-Thr 1.2e-05 CL0016