Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0776 ATGCTTTGGGAGGACCTATCCAACATGGTTTTAAGTGCTACAAGTCTACCATTAGATTCACCATGCATGTTGGAGCATGTAATGCTGCTAGTGGGGATTGTGTTTTTATCGATATGGTTGACCCAAATCATAATAAAAGGTGTGGAACTGATCAAGAAGAAGAAGAACAAGATCCCAGATCAGGACACAAAGATTCTTCCCACTGTACTGAAATATGGTTTGGCTTACAAAACTAGTATATTTTGCAGCACTGTACTGGTTGCAGTTCATGTAATCTTGTTGGTTCTGATGGTGGTAAAAGGTGAGACTCAATGCAACTCAAAACTCGTGGCTTTTGCATCAGAGACAGTTCTGGTATTAGCATGGGTAATCACATTGATATCAGTTTGCAAGATACCAAAAATCAACGTTAAGTTCCCTTTGATGCTAAGATCATGGTGGGTTTGCAGCTTCTTTTTGTGTATTATCAACTTAGCCTTTCATAGCCATTTCAGAATCAGCAAACAGACTCAGATTGGATGGAGGGAATATGCAGATTTGCTTGGCCTGCTTGCTTCAGCAGTTCTATTGGGCATTTCAATAAGAGGAAGAACTGGGATTGTGTTGATTGCTTCAGATGGAATCACTGAGCCACTTTTGAGTGAGAAAAGTGGCAAGGAATCAGAATCTTTTTCCAAGAAGGAATCTTTATATGGGAAATCTACTTTCATTCAACTCATTACCTTCTCATGGCTCAATCCCTTGTTTGCTGTAGGGTACAAGAAAGCCCTTGAACCGAGTGACATTCCCGAGGTTGCCATTGGGGAATCTGCTGAATTTCTATCATCATCCTTTGATGAGAGCCTAAGAAAGGTCAAGGAGGCTGATGGGACCTCAAATCCATCTGTCTACAAGGCAATCTATCTATTTGCTAGGAAGAAGACTCTGATCAATGCATGTTTCGCAGTAGTAAGTGCTGCAGCATCATATGTTGGCCCATACCTAATCACTGACTTTGTGAGTTTCTTATCTGAGAAGGGAAGCCGCGGGCTGAATCAAGGATACATGTTGTCACTTGGATTCTTGTGTGCCAAAATGATTGAGACAATAACTCAGAGGCAATGGATTTTTGGCGCTCGACAAGCAGGTCTTCGCCTTAGAGTGGCATTGATATCACACATATACAAGAAGGGCTTAAATCTGTCAAGTAGATCGCGCCAAAGTCACAGCGGTGGTGAGATCATGAACTATATGAGCGTAGATGTGCAGAGAATCACAGATTTCATGTATTACATAAATGTCATATGGATGCTTCCAGTGCAAGTAACCTTAGCGGTCTACATTTTACACACGAATCTTGGTTTGGGTTCATTGGCTTCGCTAGCTGCCACTCTGACAGTTATGGCTACGAACATACCTCTTACGAGAATACAGAAAAGATACCAATCTAGGATCATGGAGGCTAAGGACAGTAGGATGAAAGCCACATCAGAAGTCCTTAGGAACATGAAGACTTTGAAACTTCAATCTTGGGATACTGAATTCCAACATAGGTTAGAAGAACTGAGGGAAACAGAATCCATCTGGTTATGGAAGTCATTAAGACAAGGAGCACTTTCTGCTTTTATCTTCTGGGCCTCACCCACATTTATTTCCTTGGTAACCTTCTGGGTATGTATGTGGATGGGGATTGAACTAACAGCCGGAAGAGTTTTATCTGCGTTCGCCACATTTCGGATGTTACAGGATCCTATATTTAGCTTACCTGATTTACTCAATGTCATTGCTCAAGGGAAAGTTTCAGCAGACAGAATTGCTTCTTATCTCAAGAAAGAAGAAGTTCAACATAACGCCATTGAGAATGTTCCAAGGGACCAAACCGAGTTCGACATAGTTATTGAAAAAGGAAGATTCAGCTGGGATTCTGAGACGAGCAATCCAACCCTTGATGGAATAGATTTAAGAGTCAAAAGAGGAATGAAGGTGGCGATTTGTGGGACTGTAGGTTCCGGTAAGTCTAGCCTACTTTCCGGCATTCTGGGAGAAATGTATAAGCAATCTGGGACAGTGAAGATCAGTGGAACAAAAGCTTATGTTCCACAATCACCATGGATATTGACTGGAAATTTTAAGGACAATATTACCTTCGGAAAGGAATACAATAGTGTCAAGTATGAGAAAACTATTGAAGCATGCGCATTGATAAAGGACTTTGAGCTATTCTCCTGTGGTGACCTGACAGAGATTGGAGAAAGAGGGATCAATATGAGTGGAGGACAGAAGCAAAGGATACAAATAGCTCGTTCGGTTTACCAAGACGCCGACATATATCTCTTTGACGACCCTTTTAGCGCTGTTGATGCTCACACCGGAAGCCACATCTTCAAGGAGTGCCTTATGGGGGTTCTCAAAGAAAAAACTATACTTTATGTTACCCACCAAGTGGAGTTTCTTCCCGCAGCAGACCTTATTCTGGTGATGCAAAATGGAAGGATTGCACAAGCTGGAACCTTTGAACAACTTCTAAAGCAAAATACTGGGTTTGAAGTTTTAGTTGGAGCACATAGCCAAGCTCTAGAATCAATTCTGATGGTTGAGAATTCAAGCAGAACAACTCTAAACCCAGAACCCAAAGGCGAATCCAATGTCAATTCTCAATCAAATTCAGAACTTTCTCACACTCGACATAACACAGAGCAAGGAAGTCCCCCAGAGATCAAAGAAAAAGAAGGTAAACTAGTGCAAGATGAAGAAAGAGAAAGAGGAAGCATTTCAAGAGAAGTTTACTGGACCTATTTGACCACCGTCAAAGGCGGAGCCCTGGTTCCTTTCATAATTTTGGCTCAATCTTCATTCCAAGTACTTCAGGTTGCTAGTAACTATTGGATGGCTTGGGTCTGTCCTACATCAAGTGATGCTAAGCCTGCATTTGACATGGATTTTATCCTACTTGTTTATATGGCACTTTCTGTTGGGAGTGCACTTTGTGTGCTCCTAAGAGCCATACTAGTGGCAAAAGCTGGACTTTGGACTGCTCAGAAACTATTTATCAAAATGTTGCATAGCGTACTTCGAGCACCAATGTCATTTTTTGATTCAACTCCAAATGGCAGAATTTTGAACAGGGCCTCCACAGATCAAAGTGTGGTAGACTTGGAAATGGCAACCAAATTGGGATGGTGTGCTTTCTCAATAATACAGATTCTGGGTACCATTGCAGTAATGTCACAAGTGGCATGGCAAGTATTTGTCATCTTCATTCCAGTAACCGCCGTCTGCGTATGGTATCAAAGATACTATACACCAACAGCAAGAGAACTGGCTCGCTTGTCACAAATACAAATAACCCCAATTCTGCATCATTTTGCAGAATCATTAGCAGGAGCAGCATCAATTCGAGCTTTTGATCAAGAAGGCCGTTTTGTACATTCAAATATCGAGCTTATTGACAACTACTCAAAACCATGGTTCCATAACGTATCTGCAATGGAATGGCTTTCTTACAGATTGAATATACTATCCAATTTTGTTTTCGCCTTCTCGCTGGTTTTGCTTGTTATCCTTCCAGAAGGAATGATCGACCCAAGCATTGCTGGGTTGGCAGTAACTTATGGCATCAATTTGAATGTCCTTCAAGCTTCAGTCATATGGAACATATGTAATGCAGAAAATAAGATGATATCTGTTGAGAGAGTCATTCAATACACAAATATCAAAAGTGAAGCAGCCCTTGTGATTGAAGATTCTAGGCCACCAAACAACTGGCCTGAAATTGGAACAATATGTTTTAAAAACTTGCAGATACGTTATGCGGAACATCTACCGTGCATTCTGAAAAACATAAATTGCACATTTCCTGGAAGGAAGAAAATCGGTGTCGTGGGACGAACTGGGAGCGGAAAATCAACCTTAATACAGGCCATTTTCAGGATTGTTGAACCTTGGGAAGGAAGCATTGTAATTGATGATTTGGATGTATGCAAGATTGGTCTACATGACTTAAGGTTGAGGCTTAGCATCATTCCACAGGATCCCACAATGTTTGAAGGCACGGTTAGAGGAAACTTGGACCCACTTGATCAATACTCTGACCAGCAAGTGTGGGAGGCTTTGGATAAATGTCAGCTTGGTCAGCTGGTGAGATCAAAGCAAGAGAAATTGCAGGCCTCAGTGGTTGAAAATGGAGAAAACTGGAGTGCAGGCCAAAGGCAACTGTTTTGCCTTGGAAGGGCCTTACTGAAGAAAAGTAGCATTCTTGTGCTGGATGAAGCAACAGCATCAGTTGATTCTGCAACTGATGGAGTGATACAGAAAATTATTGGTCAAGAATTCAAAGATAGAACTGTTGTCACAATAGCCCATCGAATCCATACTGTTATCGATAGCGATTTGGTTTTGGTCCTCAGTGATGGGAAAATTGCAGAGTTCGATGCACCATCGAAGTTACTTGAAAGAGAAGATTCCTTCTTTTCTAAACTCATAAGGGAATACTCAAGAAGATCACAGAGTTTCAACTGCTTGGCCACTCAAAATGGCCAATGA 4521 0.415 MLWEDLSNMVLSATSLPLDSPCMLEHVMLLVGIVFLSIWLTQIIIKGVELIKKKKNKIPDQDTKILPTVLKYGLAYKTSIFCSTVLVAVHVILLVLMVVKGETQCNSKLVAFASETVLVLAWVITLISVCKIPKINVKFPLMLRSWWVCSFFLCIINLAFHSHFRISKQTQIGWREYADLLGLLASAVLLGISIRGRTGIVLIASDGITEPLLSEKSGKESESFSKKESLYGKSTFIQLITFSWLNPLFAVGYKKALEPSDIPEVAIGESAEFLSSSFDESLRKVKEADGTSNPSVYKAIYLFARKKTLINACFAVVSAAASYVGPYLITDFVSFLSEKGSRGLNQGYMLSLGFLCAKMIETITQRQWIFGARQAGLRLRVALISHIYKKGLNLSSRSRQSHSGGEIMNYMSVDVQRITDFMYYINVIWMLPVQVTLAVYILHTNLGLGSLASLAATLTVMATNIPLTRIQKRYQSRIMEAKDSRMKATSEVLRNMKTLKLQSWDTEFQHRLEELRETESIWLWKSLRQGALSAFIFWASPTFISLVTFWVCMWMGIELTAGRVLSAFATFRMLQDPIFSLPDLLNVIAQGKVSADRIASYLKKEEVQHNAIENVPRDQTEFDIVIEKGRFSWDSETSNPTLDGIDLRVKRGMKVAICGTVGSGKSSLLSGILGEMYKQSGTVKISGTKAYVPQSPWILTGNFKDNITFGKEYNSVKYEKTIEACALIKDFELFSCGDLTEIGERGINMSGGQKQRIQIARSVYQDADIYLFDDPFSAVDAHTGSHIFKECLMGVLKEKTILYVTHQVEFLPAADLILVMQNGRIAQAGTFEQLLKQNTGFEVLVGAHSQALESILMVENSSRTTLNPEPKGESNVNSQSNSELSHTRHNTEQGSPPEIKEKEGKLVQDEERERGSISREVYWTYLTTVKGGALVPFIILAQSSFQVLQVASNYWMAWVCPTSSDAKPAFDMDFILLVYMALSVGSALCVLLRAILVAKAGLWTAQKLFIKMLHSVLRAPMSFFDSTPNGRILNRASTDQSVVDLEMATKLGWCAFSIIQILGTIAVMSQVAWQVFVIFIPVTAVCVWYQRYYTPTARELARLSQIQITPILHHFAESLAGAASIRAFDQEGRFVHSNIELIDNYSKPWFHNVSAMEWLSYRLNILSNFVFAFSLVLLVILPEGMIDPSIAGLAVTYGINLNVLQASVIWNICNAENKMISVERVIQYTNIKSEAALVIEDSRPPNNWPEIGTICFKNLQIRYAEHLPCILKNINCTFPGRKKIGVVGRTGSGKSTLIQAIFRIVEPWEGSIVIDDLDVCKIGLHDLRLRLSIIPQDPTMFEGTVRGNLDPLDQYSDQQVWEALDKCQLGQLVRSKQEKLQASVVENGENWSAGQRQLFCLGRALLKKSSILVLDEATASVDSATDGVIQKIIGQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGKIAEFDAPSKLLEREDSFFSKLIREYSRRSQSFNCLATQNGQ 1506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0776 1506 FunFam ABC transporter C family member 5 898 1235 - -
Acco09g0776 1506 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 233 1491 - -
Acco09g0776 1506 Gene3D - 622 853 IPR027417 -
Acco09g0776 1506 Pfam ABC transporter transmembrane region 946 1179 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco09g0776 1506 Pfam ABC transporter transmembrane region 309 573 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco09g0776 1506 FunFam ABC transporter C family member 10 292 606 - -
Acco09g0776 1506 CDD ABC_6TM_ABCC_D1 310 598 IPR044746 GO:0140359
Acco09g0776 1506 MobiDBLite consensus disorder prediction 893 912 - -
Acco09g0776 1506 SUPERFAMILY ABC transporter transmembrane region 305 606 IPR036640 GO:0005524|GO:0016020
Acco09g0776 1506 ProSitePatterns ABC transporters family signature. 749 763 IPR017871 GO:0005524|GO:0016887
Acco09g0776 1506 MobiDBLite consensus disorder prediction 862 892 - -
Acco09g0776 1506 CDD ABCC_MRP_domain1 624 824 - -
Acco09g0776 1506 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1245 1484 IPR027417 -
Acco09g0776 1506 Gene3D ABC transporter type 1, transmembrane domain 898 1235 IPR036640 GO:0005524|GO:0016020
Acco09g0776 1506 Gene3D ABC transporter type 1, transmembrane domain 281 607 IPR036640 GO:0005524|GO:0016020
Acco09g0776 1506 SMART AAA_5 651 824 IPR003593 GO:0016887
Acco09g0776 1506 SMART AAA_5 1280 1472 IPR003593 GO:0016887
Acco09g0776 1506 MobiDBLite consensus disorder prediction 862 912 - -
Acco09g0776 1506 CDD ABCC_MRP_domain2 1252 1472 - -
Acco09g0776 1506 FunFam ABC transporter C family member 5 609 856 - -
Acco09g0776 1506 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 937 1217 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco09g0776 1506 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 624 847 IPR003439 GO:0005524
Acco09g0776 1506 Pfam ABC transporter 1271 1419 IPR003439 GO:0005524
Acco09g0776 1506 Gene3D - 1236 1490 IPR027417 -
Acco09g0776 1506 FunFam ABC transporter C family member 3 1237 1489 - -
Acco09g0776 1506 Pfam ABC transporter 642 776 IPR003439 GO:0005524
Acco09g0776 1506 CDD ABC_6TM_ABCC_D2 935 1229 IPR044726 GO:0140359
Acco09g0776 1506 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 309 590 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco09g0776 1506 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1256 1488 IPR003439 GO:0005524
Acco09g0776 1506 SUPERFAMILY ABC transporter transmembrane region 936 1234 IPR036640 GO:0005524|GO:0016020
Acco09g0776 1506 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 618 843 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0776 Acco-ChrAcco09 14234402 14244046 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0776 604 896 Calmodulin-binding Proteins AT2G36910 27.796 1.59e-22 103