Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0774 ATGGCCGGCCTGGACTTGGGTTCTTCACAATCTCATCACTTTCTGCATCACCATCAGCTTCAACACCGTAATCTTCAATCAGGCCACGATGATGATGATAACCAAGAAGATAGTACTAACCCTAACGGGGTTAACCCGGCCGGTCCAGGCGATGTTGTTGTTCGCCGGCCTAGGGGTCGGCCGCCGGGTTCAAAGAATAAGCCCAAGCCATCAGTGATTATCACACGTGAGAGTGCCAACGCGCTCCGAGCTCATATTCTTGAGGTAAGCAGCGGCTCTGATGTGTTTGAGTGTGTGGCCACTTATGCAAGGAGGAGACAGCGAGGGATCTGTGTGTTGAGTGGTAGCGGCACCGTCACCAATGTGACAATCCGGCAGCCATCAGCGGCTGGGGCTGTCGCGACGCTGCAGGGGCGGTTCGAGATACTGTCACTGTCCGGATCTTTCTTGCCACCTCCGGCTCCGCCTGGTGCGACGAGCCTGAGCGTATTTCTCGCCGGAGGGCAAGGTCAAGTGGTCGGAGGAAACGTGGTTGGCGCGTTGGTGGCGGCTGGGCCAATTATTGTGATTGCTTCTTCATTCACCAACGTAGCATATGAGAGATTGCCATTAGATAATGAGGAGGAACCCTTACCAGTCCAGAACGGCAGCGGCGAGGATGGCGGCCGAGACATGAATGGATTTCCGAACTCATCTTCTGGTCTTCCCTTCTTGAATTTGCCTGTAAACATGTCTCAGTTACCACTTAACGGTAATTGGGTTGAAAATTCTGGTGGAAGATCTCAGCCATATTGA 795 0.5333 MAGLDLGSSQSHHFLHHHQLQHRNLQSGHDDDDNQEDSTNPNGVNPAGPGDVVVRRPRGRPPGSKNKPKPSVIITRESANALRAHILEVSSGSDVFECVATYARRRQRGICVLSGSGTVTNVTIRQPSAAGAVATLQGRFEILSLSGSFLPPPAPPGATSLSVFLAGGQGQVVGGNVVGALVAAGPIIVIASSFTNVAYERLPLDNEEEPLPVQNGSGEDGGRDMNGFPNSSSGLPFLNLPVNMSQLPLNGNWVENSGGRSQPY 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0774 264 SUPERFAMILY AF0104/ALDC/Ptd012-like 79 212 - -
Acco09g0774 264 Pfam Plants and Prokaryotes Conserved (PCC) domain 83 196 IPR005175 -
Acco09g0774 264 ProSiteProfiles PPC domain profile profile. 79 217 IPR005175 -
Acco09g0774 264 CDD DUF296 83 166 IPR005175 -
Acco09g0774 264 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 23 216 IPR014476 GO:0003680
Acco09g0774 264 PIRSF ESCAROLA 3 260 IPR014476 GO:0003680
Acco09g0774 264 FunFam AT-hook motif nuclear-localized protein 82 209 - -
Acco09g0774 264 MobiDBLite consensus disorder prediction 1 73 - -
Acco09g0774 264 MobiDBLite consensus disorder prediction 208 230 - -
Acco09g0774 264 Gene3D - 82 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0774 Acco-ChrAcco09 14084903 14085697 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0774 53 259 AT-hook Motif Nuclear Localized (AHL) Family AT2G35270 71.981 3.73e-87 259