Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0712 ATGTTAATGCAGAGTTCTCTTCCTAGTCCAATTGAAGCTGCTATATTTCATGTATCTGATAAAGGGAAGGAAGATGCTCTATGTGACTGGATGCCTAGTGCTGAAACTTGGCAGGTGTGCCTGAAATGCAAAAAATACCCTCTTTATTGCTGCAGAAAAGTTGAAGCAATGCAAGAACAAGAGGATCGAAGGAATGTTGATGTTCCATGCTACAGAAAAGTTGAAGCAGAGCAAGAGGATAGAAGAAATGATGATGTTCCGTGCTGCAGAAAAGTTGAAGCAATGCAAGAGCATGAGGATAGAAGGAACGATGATGTTCCGTGCTGCAGAAAAGTTGAAGCAATGCAAGAGGTAGAGGATAGAAAGAATGAAGATGTTCCATGCAGCTCAAACTACATAAGCAGCTTAGGTCGACCATCAACTGCCAGTTCAATGACTGGAAATACTGTGCCTAATATAGTTTACAAGAGAAAGAAGCTACGTAAGAGTTCAACCGCACCCCTTTTAAAAATAGGACCCATGCCTGTGCCAGCAAGTGCCAATTGCCCTTCATTTATTAGCCATTGTGCTAATAGATCATCATTGGAGCATCAGCCAGCCGGCTCTCAAGTTGAGCATGATATTGAAATGGTTAAAGACCCTGTTGCACCCATTGTCTTATGTGAAACAACAATAGATAACGGCAGACCTAAAAATTTAGGTATTGACAGCATTAATGATAGTTGCTCCACATCAAAATCAATTATGGAAATTGTTTCAGATTCCAAAGAAACTGGAGTGGATGACACTGGTGAATGCTCCTCTTCTAGTGTATTAGTCATGGATGGCCCTAGAGAAGACCTATCAGCAAGGGATCTCTGCATCAAAGTTCTAAGAAGCCATGGATTCCTTGGAGGGGGTTCTTGTGCTGATACTGTAGCTTCTCAAGAACAGGCTGCTGCCTCTGGTGATAGTTTCAGTTCCCGTTCATGCAAAATATGTGGCAATTTAGATGGCTCATTGAAAATGCTCATATGTGATCGTTGTGAAGAGGCATACCATCCATCCTGCATTGTTCCACGTATGAAGAAGTTACCAATTGATGAATGGTTTTGTCATTCATGTATAAAAAAGAAGCTAAAAATTCTTAAGGAGAAGATTATTAAAAGTTCACCAACTATCAACAGTGAAATGGAATTACACAGATCTTCCTCAGTTAATGGAGGATTGAATCCTATACTGTTGATGTTGAACGATTCTGAGCCAAGTACAACTGGTGTACGGGTTGGTAAAGGTTTTCAAGCAGAAGTTCCTGAATGGTCAGGTCCAATAGGAAGTGATGACGCTTGTGCTGAACTGTTGGAAATTGGTTCTTCAGAATTTTCCAGTTTTCAGGAAAAGAATCTCAAAAGGTCAGCTAGAATCAGCCCCATTTGTAATTGGCTTCAGTGTCAGGAGGTTGTAGATAGAGCCAAAGGAACTATATGTGGGAAATGGCGCAGGGCTCCTATTTTTGAAGTCCAAACTGATAAATGGGAGTGCTTCTGTGCCATCCATTGGGATCCAGCTCATGCTGATTGTGCGGCGCCTCAGGAGTCGGAAACAGACCAAATTCTGAAGCAACTGAAGCATGTAGAATTGTTGAGGACACGACTAAGCGCGAAGCGGTCAAAATTCGCTGGCAAAAAGGGTGGCCAATGA 1680 0.419 MLMQSSLPSPIEAAIFHVSDKGKEDALCDWMPSAETWQVCLKCKKYPLYCCRKVEAMQEQEDRRNVDVPCYRKVEAEQEDRRNDDVPCCRKVEAMQEHEDRRNDDVPCCRKVEAMQEVEDRKNEDVPCSSNYISSLGRPSTASSMTGNTVPNIVYKRKKLRKSSTAPLLKIGPMPVPASANCPSFISHCANRSSLEHQPAGSQVEHDIEMVKDPVAPIVLCETTIDNGRPKNLGIDSINDSCSTSKSIMEIVSDSKETGVDDTGECSSSSVLVMDGPREDLSARDLCIKVLRSHGFLGGGSCADTVASQEQAAASGDSFSSRSCKICGNLDGSLKMLICDRCEEAYHPSCIVPRMKKLPIDEWFCHSCIKKKLKILKEKIIKSSPTINSEMELHRSSSVNGGLNPILLMLNDSEPSTTGVRVGKGFQAEVPEWSGPIGSDDACAELLEIGSSEFSSFQEKNLKRSARISPICNWLQCQEVVDRAKGTICGKWRRAPIFEVQTDKWECFCAIHWDPAHADCAAPQESETDQILKQLKHVELLRTRLSAKRSKFAGKKGGQ 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0712 559 SMART PHD_3 323 369 IPR001965 -
Acco09g0712 559 ProSitePatterns Zinc finger PHD-type signature. 324 368 IPR019786 -
Acco09g0712 559 Gene3D - 472 537 - -
Acco09g0712 559 Pfam PHD-finger 324 370 IPR019787 -
Acco09g0712 559 PANTHER TRANSCRIPTION INTERMEDIARY FACTOR 246 374 - -
Acco09g0712 559 ProSiteProfiles Zinc finger CW-type profile. 468 528 IPR011124 GO:0008270
Acco09g0712 559 SUPERFAMILY FYVE/PHD zinc finger 316 375 IPR011011 -
Acco09g0712 559 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 307 392 IPR013083 -
Acco09g0712 559 ProSiteProfiles Zinc finger PHD-type profile. 321 371 IPR019787 -
Acco09g0712 559 FunFam uncharacterized protein LOC106759733 isoform X4 472 537 - -
Acco09g0712 559 Pfam ELM2 domain 420 520 IPR000949 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0712 324 372 C2H2 Transcription Factor Family AT3G01460 36.735 5.71e-06 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Acco09g0712 PHD 2.2e-10 CL0390