Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0681 ATGTCTCATTATTTCTTCAAAGTTCTCATCGGAGAGTGGAAGAGCAAACTGAGAATCCCTCAACTGTTTGTCTCCAGTTTTAGTCTCGCACCTAAGACAGTCATACTCATTAATGCTTCTTCAAAAAATCTATGGAAGGTTGATATGGAGCAAGAAGAAGAAGATCCCATAGAATTATACTTCAAACAGGGTTGGTCTAAATTTGTAAAAGACAACACTTTAATGGCTGCAGATTTCCTCATTTTCAAGTTTGATGGGAATTCAACTTTTAAAGTTGTTATCTGTGGCAAATCTGCCTGTGAAAAAATGCTTGAGAGCCAGGCAAGAACACAAATGAACCAGAAGAAAACCCAGAAACAAAGCTATCATAATAATAAAAAGAGAGCATCATCAACTGGAGATTGTGGAGAGAATCGGAAAGGAAAAGATCCGATTCTTGTTGAGATAAAGGAGGCGAAATTAGATTGTATTGATTCTGGAAATTCCAGCCAAGAAACGTGGGACGAAACCTGGGATGGGAAAGAAGAACAAGAACAAGAAGAAAGTGACAAGTTTGGGGATATTAATTCTGAACCTCATGATACTATCATGAATATTGGTAAGCTAATTCAAAAGCTAGCATTTTCCCTTGATAGATAA 639 0.3693 MSHYFFKVLIGEWKSKLRIPQLFVSSFSLAPKTVILINASSKNLWKVDMEQEEEDPIELYFKQGWSKFVKDNTLMAADFLIFKFDGNSTFKVVICGKSACEKMLESQARTQMNQKKTQKQSYHNNKKRASSTGDCGENRKGKDPILVEIKEAKLDCIDSGNSSQETWDETWDGKEEQEQEESDKFGDINSEPHDTIMNIGKLIQKLAFSLDR 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0681 212 SMART B3_2 5 98 IPR003340 GO:0003677
Acco09g0681 212 Pfam B3 DNA binding domain 5 96 IPR003340 GO:0003677
Acco09g0681 212 PANTHER B3 DOMAIN-CONTAINING 4 182 - -
Acco09g0681 212 MobiDBLite consensus disorder prediction 159 193 - -
Acco09g0681 212 CDD B3_DNA 3 95 IPR003340 GO:0003677
Acco09g0681 212 SUPERFAMILY DNA-binding pseudobarrel domain 3 100 IPR015300 -
Acco09g0681 212 Gene3D - 1 100 IPR015300 -
Acco09g0681 212 ProSiteProfiles B3 DNA-binding domain profile. 2 98 IPR003340 GO:0003677
Acco09g0681 212 MobiDBLite consensus disorder prediction 110 140 - -
Acco09g0681 212 MobiDBLite consensus disorder prediction 110 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0681 Acco-ChrAcco09 11266890 11268187 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0681 5 114 B3 DNA Binding Superfamily AT3G06160 35.714 1.62e-14 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Acco09g0681 B3 2.3e-13 CL0405