Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0675 ATGGTTCTCAGTAGCCGATTTTTCAGAGCTCATTTAGTTATTAGTGTCTTGCTGCTTCTTGTTATTAGCATCACCGATGGGTCTGATGCTGATATTTCCTGCTTGAAAAACATACAAGATTCACTTGAAGATCCTAATAATTATTTGAAGTCTTCCTGGAATTTCAATAATCAAACAGCAGGCTTTATCTGTCACTTTACTGGGGTTGAGTGTTGGCATGATGATGAGAACAGAGTCTTAAACCTCAAGCTGTCAAATATGGGACTCAAGGGTCAATTTCCTCGTGCCATACAAAATTGCACAAGCTTAACTGGATTGGATCTTTCGATCAACAAACTCTCTGGAATCATTCCAGCAGATATTAATAAACTTCTTGGCTTTGTGGTAACCCTGGACCTCTCATCAAATGACTTTTCAGGGGGGATCCCTGCGGGCCTTGCAAATTGTTCCTATATTAATACCCTAAAACTTGATCAAAATCAATTAACTGGTCAAATTCCACCACAGCTTGCCCAGCTCAAACGGATTAAGACTTTTACTGTCACAAATAATCTTTTGACAGGGCCAGTTCCATCTTTTGTAGGCAAAGAGGGAATTACAGCAGATAGTTATTCAAATAATTCAGGACTTTGTGGGGGACCCTTGGAGCAATGCGGGCTGACGAAAGTTAACACTGCAGTTATAGCTGGTGCTGCTGTTGGTGGGGTAACTTTTGCAGTACTAGCATTGGGTGTTGTGGCATTCTTCATTGTCCGCCGAGCCTCCGTGAAGAAGGAAGAGGATCCGGAAGGAAATAAATGGGCAAGAAGTTTAAAGGGAACAAAAGGAATTGAGGTTTCTATGTTCGAAAAATCAGTAAAAATGAAATTGAGTGATCTCATGAAGGCGACTAACAATTTCAGTAAAAGCAATATCATTGGTTCAGGAAGGACAGGGACTATGTACAAAGCTGTCCTTGATGATGGCAGCACAATGTTCATGGTTAAAAGGTTGCAGGAATCTCAGCACCCGGAAAAGGAATTTGAATCTGAGATGGCTACATTGGGGACTGTTAGACACCGTAACTTGGTTTCCCTTTTAGGTTTTTGTGTGGCCAAACAGGAGAGGCTTTTGGTGTATAAATATATGGAAAATGGAAGCCTTCATGATCAGCTACGTCCTGATACTGGTGGGAGCACCATGGAGTGGTCTTTAAGGCTAAAGATTGCAATTGGGGCAGCCAAAGGACTAGCATGGCTTCATCATAGCTGCAATCCTCGTATTATCCACCGAAACATAAGCTCCAAGTGCATCTTGTTGGATGCAGATTTTGAGCCAAAAATTTCTGATTTTGGCCTTGCTAGATTGATGAATCCAATTGACACACATTTGAGTACTTTTGTAAATGGTGAGTTTGGAGATCTCGGTTATGTTGCTCCTGAATATACAAGAACTCTGGTGGCTACGCCAAAGGGAGATGTCTATAGCTTCGGTACTGTGCTTCTAGAATTGATGACGGGTGAGAGGCCTACCAATGTGGCAAAGGCTCCTGAAACTTTCAAAGGAAATCTGGGGGAGTGGATTTTGACACTATCAAGCAAATCTGAAGTCCGGGATGCTATCGATGAATCACTACTTGGGAAGGGAGTTGATAATGAGATTTTCCAGTTTCTCAAGGTTGCATGCAACTGTGTTTCACCAAATCCAAAGGAAAGGCCCACTATGTTTGAAGTGTACCAACTTCTTAGAGCAATTGGAAGCAGATACAATTTCACAGCTGATGACGAGATATTGGTACCTACAGATACTGGCGATGCTGCCAATTTCGAGGAACTAATTGTCGCACGAGAAGAACATAGTTGA 1842 0.4197 MVLSSRFFRAHLVISVLLLLVISITDGSDADISCLKNIQDSLEDPNNYLKSSWNFNNQTAGFICHFTGVECWHDDENRVLNLKLSNMGLKGQFPRAIQNCTSLTGLDLSINKLSGIIPADINKLLGFVVTLDLSSNDFSGGIPAGLANCSYINTLKLDQNQLTGQIPPQLAQLKRIKTFTVTNNLLTGPVPSFVGKEGITADSYSNNSGLCGGPLEQCGLTKVNTAVIAGAAVGGVTFAVLALGVVAFFIVRRASVKKEEDPEGNKWARSLKGTKGIEVSMFEKSVKMKLSDLMKATNNFSKSNIIGSGRTGTMYKAVLDDGSTMFMVKRLQESQHPEKEFESEMATLGTVRHRNLVSLLGFCVAKQERLLVYKYMENGSLHDQLRPDTGGSTMEWSLRLKIAIGAAKGLAWLHHSCNPRIIHRNISSKCILLDADFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYTRTLVATPKGDVYSFGTVLLELMTGERPTNVAKAPETFKGNLGEWILTLSSKSEVRDAIDESLLGKGVDNEIFQFLKVACNCVSPNPKERPTMFEVYQLLRAIGSRYNFTADDEILVPTDTGDAANFEELIVAREEHS 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0675 613 ProSiteProfiles Protein kinase domain profile. 300 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0675 613 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 262 375 - -
Acco09g0675 613 Gene3D Ribonuclease Inhibitor 28 219 IPR032675 -
Acco09g0675 613 Gene3D Phosphorylase Kinase; domain 1 263 375 - -
Acco09g0675 613 CDD TM_EGFR-like 225 259 - -
Acco09g0675 613 Pfam Protein kinase domain 301 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0675 613 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 376 588 - -
Acco09g0675 613 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 49 194 - -
Acco09g0675 613 Gene3D Transferase(Phosphotransferase) domain 1 376 592 - -
Acco09g0675 613 FunFam Nuclear pore complex protein NUP107 28 192 - -
Acco09g0675 613 CDD STKc_IRAK 306 575 - -
Acco09g0675 613 SUPERFAMILY Protein kinase-like (PK-like) 284 575 IPR011009 -
Acco09g0675 613 SUPERFAMILY L domain-like 30 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0675 Acco-ChrAcco09 10663255 10665500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0675 12 589 Receptor kinase-like Gene Family AT3G28450 47.449 0.0 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Acco09g0675 Pkinase 3.2e-40 CL0016