Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0640 ATGAGATTTGAGAATGATGTGCATCTGCTGAATTATGAGCCTGCATACTTTTCTTCCAGATTTTTGTTGTTGGTGCTGCTTCTAAAACTAGGGAAAGGTCAAAACCAGGATGTACCTGATGATGAAATTGTTCCATTCCATCTCTATAACAATGGGACGATGGTTGAGTTCTCTTCTATTCCTGCTCTCAATGGAATCAGATTCGCCATCAATAACATGTACAATGAATCCGACTTCTTATACATGTCCTTACGTGATCCAAAAAGTTGCCTTCCCAGACTCTTTATTCAACATAGTCTTTTCAATTCATCCATTTATCCTCTAGAGTTTGTAGGCTGGAGTGAAAATATTACTTTCTTTGATTGTTCTTCAGCTGGGTTGAGACACCTGAGAAATATAAACAACGTACTGGATATGTTCGTGTGCCCAATTTATGCTGTTTCCTCTGAAGATAGTATCTTCATGTGGGACGTAGCTTACTGCACCCTGATGTTTGAGGTAGTTTCGCCAATTAGTGCATCTCGGCTTCAGGACTTGGACATAGAACTAAGATGGCGCAGGCCACAGCCAAAATCTGAAGTTCAAAAGCACAAAACTAGTTTGGTTCCCGCAATTGTTATACCAGGGTCAATTACGCTGGTGTTGCTTTTCATTGTAAGCTCTTACATATATCGCTACTTAAAGAAGAAGGGAGAAGATCAAGAAAGATTGGAAAAGTTTATGGAAGATTACAGGGCAATGAAGCCTACTAGATTCTCTTATGCTGATCTCAAAAGAATTACAAACCATTTCAAGGATAAAATAGGCGAAGGAGCTCATGGAACTATCTTTAAAGGTAAGTTATCTTCCGAAATTCAAGTGGCTGTAAAAGTACTTAATAATTCAGATACCGATGGGCAAGACTTCATTAATGAAATGGGGACTATGGGCAGAATTCATCACATCAATATTGTCCGTTTGCTGGGCTTTTGTGCTGATGGTTTTCATCGTGCTCTTGTTTATGACTTTTTTCCTAACGGTTCACTTCAAAAGTTCATGTCTTCCCCTGACAACAAAGAAAATTTCCTTGGATGGCTAAAGTTACAACAATTAGCCCTTGGCATTGCCAGAGGGATTGACTACCTTCACCAAGGTTGTGATTATAGAATTCTTCACTTTGACATCAATCCTCATAATGTGTTATTAGATCACAATTTTATTCCTAAAATTTCTGATTTTGGTCTTGCGAAATTGTGTTCTAAGAATCAGAGTACAGTGTCGATGACAGCAGCTAGAGGAACTTTAGGTTATATTGCACCTGAAGTTTTCTCTCAAAACTTTGGGAAAGTTTCTTATAAATCAGATATTTACAGTTATGGAATGTTATTGTTAGAGATGGTTGGGGGAAGAAAAAATGTTGACACAAATCGAGAAACTTTTCAAGTCATATACCCATGTTGGATCCATAATCTGCTTGAAGGAAGAGACACAAATGTTTATATAGAGGATGATGGTGATGATAGAATTGCTAAGAAACTAGCAATTGTGGGACTTTGGTGTATTCAGTGGCATCCAATAAGCCGGCCATCCATGAAAATGGTGATACAGATGCTGGAAGGAGAAATGGATAAATTAGAGATGCCTCCTACTCAATTCGATAATGCTACTTCAATCAATTCTACCATTATTCCTACTAGACATTTGAACTCAGAGTTGGAAGTGATTCCTGAATCAGAATAA 1719 0.3793 MRFENDVHLLNYEPAYFSSRFLLLVLLLKLGKGQNQDVPDDEIVPFHLYNNGTMVEFSSIPALNGIRFAINNMYNESDFLYMSLRDPKSCLPRLFIQHSLFNSSIYPLEFVGWSENITFFDCSSAGLRHLRNINNVLDMFVCPIYAVSSEDSIFMWDVAYCTLMFEVVSPISASRLQDLDIELRWRRPQPKSEVQKHKTSLVPAIVIPGSITLVLLFIVSSYIYRYLKKKGEDQERLEKFMEDYRAMKPTRFSYADLKRITNHFKDKIGEGAHGTIFKGKLSSEIQVAVKVLNNSDTDGQDFINEMGTMGRIHHINIVRLLGFCADGFHRALVYDFFPNGSLQKFMSSPDNKENFLGWLKLQQLALGIARGIDYLHQGCDYRILHFDINPHNVLLDHNFIPKISDFGLAKLCSKNQSTVSMTAARGTLGYIAPEVFSQNFGKVSYKSDIYSYGMLLLEMVGGRKNVDTNRETFQVIYPCWIHNLLEGRDTNVYIEDDGDDRIAKKLAIVGLWCIQWHPISRPSMKMVIQMLEGEMDKLEMPPTQFDNATSINSTIIPTRHLNSELEVIPESE 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0640 572 Pfam Protein kinase domain 264 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0640 572 FunFam PR5-like receptor kinase 337 542 - -
Acco09g0640 572 ProSitePatterns Protein kinases ATP-binding region signature. 268 290 IPR017441 GO:0005524
Acco09g0640 572 Gene3D Transferase(Phosphotransferase) domain 1 337 551 - -
Acco09g0640 572 PANTHER RUST RESISTANCE KINASE LR10-RELATED 234 548 IPR045874 GO:0004672
Acco09g0640 572 SUPERFAMILY Protein kinase-like (PK-like) 242 532 IPR011009 -
Acco09g0640 572 Gene3D Phosphorylase Kinase; domain 1 235 336 - -
Acco09g0640 572 ProSiteProfiles Protein kinase domain profile. 262 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0640 572 FunFam serine/threonine-protein kinase PBS1-like 229 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0640 Acco-ChrAcco09 9815172 9817321 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0640 185 542 Receptor kinase-like Gene Family AT1G66910 43.733 1.78e-100 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Acco09g0640 Pkinase 1.7e-43 CL0016