Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0605 ATGGAAAACGATTTCTTTCTAAATGCCTCAGCTCTTCACTTTGAGCCTCCTTCGTCTTCTTCTCCTTCATTACCCACTTGGCATTATCTCTCCTCCGCCGCCATGGATATTTCAGTTTCCTCCGACCAACCTCAACTACAACAACAGGACTGTTTCTACAATCCCTCATGGGAAAAGTCAACCATCGATCATAATCATCATCATCACGCTCTTCAGTTGGATTCCGCATTGAGTTCAATGGTTTCTTCTCCGGCAGCTTCCAATTCGAACTTGTCCAACGACAATTTCGTCATCAGAGAACTGATTGGGAAATTGGGCACTATTGGGAACATGGGCGAGATCTCTTCTTACATGAATGGAAATAATAACAGTACCAACACTTCATGTTACAGCACGCCTTTGAGTTCTCCTCCTAAACTGAACATTCCTCCTCCATTAATGAAAGACAAATTACCAATGGCTTTGAATTCCAGTGTGGCTGAATTCTCAGCTGATCCTGGTTTTGCAGAGAGAGCCGCCAAGTTTTCTTGCTTTGGAAGTAGGAGCTTTAATGGAAGAAGTTCAAGACAAGTTGGGATTAATAATAATGCTGACTTCACGCAGAGATCTAGTCCATTAATGGAAAATGGCAAGCTTTCTAGAGTTTCAAGTAGTCCGTCGTTGAAAGCACTTGGATCTCAAATGGAAAATAAGAATTCTCCTTTGAATTCTCAGGAGGAATCTACAATCTCTGAGCAAAACCCAAATGGCGAATCTGGGGTTAAACCTTCCCCTCCTGATATGAATTCCAGAAAGAGAAAAGCTTCTTCTAAGGGAAAACCCAAAGAAAATCCTCCCAAGGCTGCTGACGCTAATGAAGATTCAAGTGCAAAACGAAGCAAGCCAAATGAAGGGGAAGGACCTGAAAATGGTCAAGTGAAGGGAGAAGAACAGTCAAAAGGAGGTAACAACAATGAAGGGGATGAGAAACAGAGCAAAAGCAACAACTCAAAACCTCCAGAGCCTCCAAAGGACTACATTCATGTCAGAGCAAGAAGAGGTCAAGCTACAGATAGCCATAGTCTTGCTGAAAGAGTAAGAAGGGAGAAAATCAGTGAAAGAATGAAGCTTCTGCAAGATCTTGTACCTGGTTGCAACAAGGTCACTGGAAAAGCTCTTATGCTTGATGAAATCATAAACTATGTACAGTCATTGCAGCGTCAAGTTGAGGTAGAAACAGGCTTGTTTCTTTCGATGAAATTGTCCTCCGTGAACACCAGGCTTGAAGTGAGCATTGACAATCTCATCTCAAAAGATATATTTCAATCAAATAACTCTTTGGCACACCAGGCAGCAATATTCCCCTTAGATTCCTCTGCCGCAGCCTTTTTTGGCCCCAACACAGCAATCCACAATACAACCCCTAATGGAACTGTGACCCACCCAATGGAATCTTTAGATTCTGCTCTCTGTCAAAGCCTTAGCTTCCAGTTACCATCTCTGAATGGTTTCAATGAAGGTGCTTCTCAGTATCCAATGACTTTTTGTGAAGAGGACCTCCACGCCGTTGTTCAGATGGGGTTTGGTCAAACGGAAAATAGAAAAACACCAACACAATCTCCAAGCTTTAATGGTTCAAGCCAGATATCCCATATGAAAGTTGAGCTCTGA 1650 0.4255 MENDFFLNASALHFEPPSSSSPSLPTWHYLSSAAMDISVSSDQPQLQQQDCFYNPSWEKSTIDHNHHHHALQLDSALSSMVSSPAASNSNLSNDNFVIRELIGKLGTIGNMGEISSYMNGNNNSTNTSCYSTPLSSPPKLNIPPPLMKDKLPMALNSSVAEFSADPGFAERAAKFSCFGSRSFNGRSSRQVGINNNADFTQRSSPLMENGKLSRVSSSPSLKALGSQMENKNSPLNSQEESTISEQNPNGESGVKPSPPDMNSRKRKASSKGKPKENPPKAADANEDSSAKRSKPNEGEGPENGQVKGEEQSKGGNNNEGDEKQSKSNNSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEVETGLFLSMKLSSVNTRLEVSIDNLISKDIFQSNNSLAHQAAIFPLDSSAAAFFGPNTAIHNTTPNGTVTHPMESLDSALCQSLSFQLPSLNGFNEGASQYPMTFCEEDLHAVVQMGFGQTENRKTPTQSPSFNGSSQISHMKVEL 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0605 549 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 348 398 IPR011598 GO:0046983
Acco09g0605 549 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 234 461 IPR024097 GO:0006355
Acco09g0605 549 MobiDBLite consensus disorder prediction 525 549 - -
Acco09g0605 549 Gene3D - 345 426 IPR036638 GO:0046983
Acco09g0605 549 FunFam Basic helix-loop-helix transcription factor 345 422 - -
Acco09g0605 549 SMART finulus 354 404 IPR011598 GO:0046983
Acco09g0605 549 MobiDBLite consensus disorder prediction 186 339 - -
Acco09g0605 549 MobiDBLite consensus disorder prediction 186 253 - -
Acco09g0605 549 MobiDBLite consensus disorder prediction 260 306 - -
Acco09g0605 549 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 346 405 IPR036638 GO:0046983
Acco09g0605 549 MobiDBLite consensus disorder prediction 314 328 - -
Acco09g0605 549 CDD bHLH_AtBPE_like 338 428 - -
Acco09g0605 549 Pfam Helix-loop-helix DNA-binding domain 352 399 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0605 Acco-ChrAcco09 9043931 9046627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0605 1 503 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 45.211 3.72e-111 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco09g0605 HLH 4.3e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g0605 09 9043931 9046627 Acco07g1662 07 32727155 32729741 CCT