Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Acco09g0603 | ATGGATGAGGATTTCGATATGCCCCCGCAGGAGGAGATGAGCGAGGACTTCGATCTCCCCGATGAAGACGCTACTTTTAAGGTTGGAGAGGAGAAGGAGATCGGAAAGCAGGGATTGAAGAAGAAGCTCCTCAAGGATGGTGAAGGCTGGGACACACCTGAAGTGGGCGATGAAGTCGAAGTTCATTACACGGGAACGCTGCTTGATGGGACCAAGTTTGATTCGAGCCGCGACAGAGGGACCCCCTTTAAGTTCACGCTTGGACAAGGGCAAGTAATTAAAGGATGGGATCAGGGTATTAAAACCATGAAGAAAGGTGAAAATGCCATTTTCACCATCCCTGCTGAACTAGCATATGGTGAATCTGGTTCGCCTCCAACCATTCCTCCAAATGCTACTCTTCAATTTGATGTTGAGCTTCTGTCTTGGACCAGTGTGAAAGACATAAGCAAGGATGGTGGCATATTTAAGAAAATACTGACTGAAGGAGATAAATGGGAGAACCCCAAAGATCCTGATGAAGTTTTAGTTAAATATGAAGCTCGTCTTGAAGATGGAACGCTTGTATCAAAATCTGATGGAGTGGAGTTTACTGTGAAGGAGGGTTACTTTTGTCCTGCTTTTGCAAAGGCTGTGAAAACCATGAAGAAGGGAGAGAAAGTGCTTTTAACTGTGAAGCCGCAATATGGTTTTGGTGAGAAGGGTAAAGCAGCACATGGTGATGAAGGTGCAGTTCCACCAAATGCATCCTTGCAGATTACTCTTGAATTGGTATCTTGGAAGACTGTTTCAGAAGTAACTGATGATAAGAAGATCATTAAGAAAATCCTCAGTGAAGGGGAAGGATATGAGCGTCCAAATGAAGGAGCTGTTGTGAAAGTGAAATTGATTGGCAAACTGCAGGATGGCACTGTCTTTGTGAAGAAGGGCCATGATGAAGAGCTTTTTGAATTCAAAACAGATGAAGAGCAAGTCATTGATGGACTCGATAGAGCAGTCTTGACTATGAAAAAGGGTGAAGTAGCCTTGTTGACTGTTGCTCCTGAGTATGCCTTTGGTTCATCTGAGTCCAAACAAGAATTGGCTGTTGTTCCTCCCAACTCAACTGTTTATTATGAAGTTGAACTAGTATCATTTGAGAAGGAGAAGGAGTCCTGGGATATGAACACACAGGAGAAGATTGAAGGTGCTAGTAAGAAGAAAGAAGAAGGAAATGCGTGGTTTAAGAGTGGAAAATATGCTAAAGCTTCTAAAAGATATGACAAGGCTGCCAAGTACATAGAGTATGATTCCTCCTTCAGTGAAGAGGAGAAGAAGCAGGCTAAGGCACTGAAGGTTGCTTGCAACCTGAACAATGCGGCTTGCAAGTTGAAGTTGAAAAATTACAGCGAAGCTGAGAGATTGTGTACTAAGGTTCTGGATCTTGAAAGCACAAACGTAAAGGCACTTTATAGAAGAACTCAGGCTTATATCGAGTTGACTGACTTGGATTTGGCAGAAGTTGATATTAAGAAAGCTCTTGAGATAGACCCTGACAACAGGGATGTGAAGCTGGAGTACAAGACTTTGAAGCAGAAGCAGAAGGAGTATAACAGAAAGGAGGCTAAATTTTATGGAAACATGTTTGCCAAGATGACTAAGGCAGAATCGAATGCCAATAATAAAGCAGCAGCGAACAAGGATGCTGAACCTATGAGCATTGACAGCAAAGCATAA | 1716 | 0.4295 | MDEDFDMPPQEEMSEDFDLPDEDATFKVGEEKEIGKQGLKKKLLKDGEGWDTPEVGDEVEVHYTGTLLDGTKFDSSRDRGTPFKFTLGQGQVIKGWDQGIKTMKKGENAIFTIPAELAYGESGSPPTIPPNATLQFDVELLSWTSVKDISKDGGIFKKILTEGDKWENPKDPDEVLVKYEARLEDGTLVSKSDGVEFTVKEGYFCPAFAKAVKTMKKGEKVLLTVKPQYGFGEKGKAAHGDEGAVPPNASLQITLELVSWKTVSEVTDDKKIIKKILSEGEGYERPNEGAVVKVKLIGKLQDGTVFVKKGHDEELFEFKTDEEQVIDGLDRAVLTMKKGEVALLTVAPEYAFGSSESKQELAVVPPNSTVYYEVELVSFEKEKESWDMNTQEKIEGASKKKEEGNAWFKSGKYAKASKRYDKAAKYIEYDSSFSEEEKKQAKALKVACNLNNAACKLKLKNYSEAERLCTKVLDLESTNVKALYRRTQAYIELTDLDLAEVDIKKALEIDPDNRDVKLEYKTLKQKQKEYNRKEAKFYGNMFAKMTKAESNANNKAAANKDAEPMSIDSKA | 571 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Acco09g0603 | 571 | Gene3D | - | 262 | 381 | IPR046357 | GO:0003755 | |
| Acco09g0603 | 571 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 172 | 261 | IPR001179 | GO:0003755 | |
| Acco09g0603 | 571 | Gene3D | Tetratricopeptide repeat domain | 383 | 540 | IPR011990 | GO:0005515 | |
| Acco09g0603 | 571 | MobiDBLite | consensus disorder prediction | 549 | 571 | - | - | |
| Acco09g0603 | 571 | Pfam | Tetratricopeptide repeat | 481 | 513 | IPR019734 | GO:0005515 | |
| Acco09g0603 | 571 | SUPERFAMILY | FKBP-like | 32 | 148 | - | - | |
| Acco09g0603 | 571 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 52 | 141 | IPR001179 | GO:0003755 | |
| Acco09g0603 | 571 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 283 | 377 | IPR001179 | GO:0003755 | |
| Acco09g0603 | 571 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 167 | 257 | IPR001179 | GO:0003755 | |
| Acco09g0603 | 571 | FunFam | Peptidylprolyl isomerase | 148 | 261 | - | - | |
| Acco09g0603 | 571 | SUPERFAMILY | FKBP-like | 147 | 263 | - | - | |
| Acco09g0603 | 571 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 289 | 380 | IPR001179 | GO:0003755 | |
| Acco09g0603 | 571 | ProSiteProfiles | TPR repeat profile. | 480 | 513 | IPR019734 | GO:0005515 | |
| Acco09g0603 | 571 | SUPERFAMILY | FKBP-like | 266 | 399 | - | - | |
| Acco09g0603 | 571 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 56 | 144 | IPR001179 | GO:0003755 | |
| Acco09g0603 | 571 | MobiDBLite | consensus disorder prediction | 1 | 19 | - | - | |
| Acco09g0603 | 571 | Gene3D | - | 148 | 261 | IPR046357 | GO:0003755 | |
| Acco09g0603 | 571 | SUPERFAMILY | TPR-like | 385 | 545 | IPR011990 | GO:0005515 | |
| Acco09g0603 | 571 | Coils | Coil | 513 | 533 | - | - | |
| Acco09g0603 | 571 | FunFam | Peptidylprolyl isomerase | 385 | 540 | - | - | |
| Acco09g0603 | 571 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 9 | 147 | - | - | |
| Acco09g0603 | 571 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
| Acco09g0603 | 571 | Gene3D | - | 31 | 147 | IPR046357 | GO:0003755 | |
| Acco09g0603 | 571 | SMART | tpr_5 | 397 | 430 | IPR019734 | GO:0005515 | |
| Acco09g0603 | 571 | SMART | tpr_5 | 480 | 513 | IPR019734 | GO:0005515 | |
| Acco09g0603 | 571 | SMART | tpr_5 | 446 | 479 | IPR019734 | GO:0005515 | |
| Acco09g0603 | 571 | FunFam | Peptidylprolyl isomerase | 262 | 382 | - | - | |
| Acco09g0603 | 571 | FunFam | Peptidylprolyl isomerase | 29 | 147 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Acco09g0603 | Acco-ChrAcco09 | 8958080 | 8961952 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Acco09g0603 | 1 | 545 | Calmodulin-binding Proteins | AT3G25230 | 80.328 | 0.0 | 885 |