Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0600 ATGGCTATTCACCCTCCTATTTTGGAAGCAGGGGAAGGTGTTATTAAATGGAATGGTACTCATTCGGGATTGTTCTCAGTTAAATCAACATATTTCCACATTGAGCCTCCAAATGATAACCTGTTTCATTCCTGCTACAATCTGATCTGGAAATGGCAAGGAATAGAACTAATGACTTTATTGACAGATATTCAAGTAGAAAAGCCTTCCCTATCCATTCTCTTCGTCGAAGCTGTTAACGATTCCGAACTAGGAGGCCGCCGGTGCTTGGTCGTCATCGTGCGTGGGATAATCTGTAACCGTTCTAGCCAGGGAGATGCAGAGATGAGTTGTTGGTCACCAGCATCTGTTTTTACTAATCAACTTATACCACTTTCTGCTGCAAGCACCAAGTCTGATGTTAATATCAAAAGCAGCACCAGTTTTATATGTAGCCCAAGTCAAGGAAGGTGCTATCTCTCTGTTTCTGAGAGCCATCATAAAGTCAGGAGACTCAGGATTTCTGGGGTAGTTAAATCTGGACAAGGATTGACACAATTTCTGGGGCGACAAGGAACTTGGGAAGAACCTGATGATGGCAGTGGTAGTGAGCATGATGAAGAAGAAGAAGATGAGGAAACAGAAGATGAGAACTATGGCTTTGAAAGTGATTGGGAAGAGGAAGAGATAACGTCATCAGCTGTTAATAGTGTTGTTTCAGTGGACAAGTATGGGGAGGATATTAAAAAAGAGGTTGAACAGCTTTTGGAGCCTGAAGAAAGAGCAGTCTTGCAACAGAATGTGACTCCAAACTTTGAAAAAATTTCAACTGAAAAATGGAGCCCACTGCATACTTTAGCACTATCAACACAGATAAGATGTATGGATCAGCTGCTTGAAAGTGGTGTTGATATTGATCTTAAGAACAAGGAAGGTCTCACCGCACTTCATATAGCTACTATAGGAAAGAAAGAAGCTGTAATAAGCCATCTTTTACGTAAAGGTGCAAGTCCTCATGTCAGGGATAAGGATGGTGCCACCCCGCTTCATTACGCAGTTCAAGTTGGTGCCAAGCAAACTATAAAGTTATTGATCAAATATGAAGTTGACGTCAATGTTGCAGATAATGAAGGTTGGACCCCATTGCATGTTGCTATTCAAAGCAGAAATAGAGATATTGCAAAAATTTTGTTAGTCAACGGTGCAGATAAGAAAAGAAGAAATAAGGATGGGAAAACGGCATTGGATCTAAGTTTATGTTATGGGAAGGACTTCAAGTCTTATGACCTTGGCAAATTATTGAAGGTAGTTCCAGTTGACACTGATTATTGA 1311 0.4073 MAIHPPILEAGEGVIKWNGTHSGLFSVKSTYFHIEPPNDNLFHSCYNLIWKWQGIELMTLLTDIQVEKPSLSILFVEAVNDSELGGRRCLVVIVRGIICNRSSQGDAEMSCWSPASVFTNQLIPLSAASTKSDVNIKSSTSFICSPSQGRCYLSVSESHHKVRRLRISGVVKSGQGLTQFLGRQGTWEEPDDGSGSEHDEEEEDEETEDENYGFESDWEEEEITSSAVNSVVSVDKYGEDIKKEVEQLLEPEERAVLQQNVTPNFEKISTEKWSPLHTLALSTQIRCMDQLLESGVDIDLKNKEGLTALHIATIGKKEAVISHLLRKGASPHVRDKDGATPLHYAVQVGAKQTIKLLIKYEVDVNVADNEGWTPLHVAIQSRNRDIAKILLVNGADKKRRNKDGKTALDLSLCYGKDFKSYDLGKLLKVVPVDTDY 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0600 436 Gene3D - 237 340 IPR036770 -
Acco09g0600 436 MobiDBLite consensus disorder prediction 181 219 - -
Acco09g0600 436 SUPERFAMILY Ankyrin repeat 263 415 IPR036770 -
Acco09g0600 436 ProSiteProfiles Ankyrin repeat profile. 337 369 IPR002110 GO:0005515
Acco09g0600 436 SMART ANK_2a 337 366 IPR002110 GO:0005515
Acco09g0600 436 SMART ANK_2a 271 300 IPR002110 GO:0005515
Acco09g0600 436 SMART ANK_2a 370 399 IPR002110 GO:0005515
Acco09g0600 436 SMART ANK_2a 304 333 IPR002110 GO:0005515
Acco09g0600 436 MobiDBLite consensus disorder prediction 193 219 - -
Acco09g0600 436 Gene3D - 341 427 IPR036770 -
Acco09g0600 436 Pfam Ankyrin repeats (3 copies) 320 400 IPR002110 GO:0005515
Acco09g0600 436 ProSiteProfiles Ankyrin repeat profile. 271 303 IPR002110 GO:0005515
Acco09g0600 436 ProSiteProfiles Ankyrin repeat region circular profile. 370 396 - -
Acco09g0600 436 PANTHER ANKYRIN REPEAT PROTEIN 269 347 - -
Acco09g0600 436 Pfam Ankyrin repeats (many copies) 273 317 IPR002110 GO:0005515
Acco09g0600 436 ProSiteProfiles Ankyrin repeat profile. 370 402 IPR002110 GO:0005515
Acco09g0600 436 ProSiteProfiles Ankyrin repeat profile. 304 336 IPR002110 GO:0005515
Acco09g0600 436 ProSiteProfiles Ankyrin repeat region circular profile. 337 369 - -
Acco09g0600 436 ProSiteProfiles Ankyrin repeat region circular profile. 304 336 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0600 288 396 Ion Channels AT2G25600 32.143 1.21e-09 58.5