Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0578 ATGGATGACATCTATGATCGTACGTGGCGTGCGGACAACATAACTTCTAAATTGCAAGATTGGCATGTATTCAATAAACCTGCGGAAATTGATCTTGAAAGCACAAATGATTCTTATAGATTACCAGCAGGAGTGCTACAATCTGCAGTCAAATCATCGAATCGCTCCTCTACTTTGAACTTTGACTGTGGTTCTGTTTGGAGGCCTCCATTTGAATTTTCTTTCAGATATTACATCATCTTTCATTTTGCTGAAATTGAACAGCTTCCCTTTGGGCAGAAAAGGTTAGAGTCCCTGGACCTGTCAGATAATCACTTATCAGGAACAATACCAGAATTTCTAGCTGAATTGCCAAAGTTGAGAGTTCTTTTGGATGGTAACGCTGATCTTTGCTTGACGGATCCATGCAAAAAGCACAAGTTCGTTATTCCACTAATAGCATCTGTTTCTGCTTTGATTGTTTTAATCTTGGTTTCGCTTGGAATATGGATCCTTAGAATTAAAAGACAGAAAGATTTTTCCAATCCTTCTACATCACCTACTTCTCTTCCAGAATCATCTACTTCTGTCCCTACTCCTCCTCCTCTTTCTCCATTGATTAGGAGGAATTTGGTTTCTCTGATTGGATATTGCGAAGAAGCTGGTGCGAGGGCATTAGTTTATGAGTACATGGCTAATGGTGACCTCCGCCGACATTTATCCGGGTTAGAATACTTGCATAATGGTTGTAAGCCAGCAATAGTGCACAGAGACTTGAAGACCACCAACATTTTGCTAGATGAAAATATGGAAGCTAAAATTGCTGACTTTGGGTTGTCCAGAGCTTTTGCAAATGATATTGACAGTCACGTCTCAACTCGTCCTGCTGGAACAGTTGGTTACCTTGATCCTGAGTAA 897 0.4036 MDDIYDRTWRADNITSKLQDWHVFNKPAEIDLESTNDSYRLPAGVLQSAVKSSNRSSTLNFDCGSVWRPPFEFSFRYYIIFHFAEIEQLPFGQKRLESLDLSDNHLSGTIPEFLAELPKLRVLLDGNADLCLTDPCKKHKFVIPLIASVSALIVLILVSLGIWILRIKRQKDFSNPSTSPTSLPESSTSVPTPPPLSPLIRRNLVSLIGYCEEAGARALVYEYMANGDLRRHLSGLEYLHNGCKPAIVHRDLKTTNILLDENMEAKIADFGLSRAFANDIDSHVSTRPAGTVGYLDPE 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0578 298 PANTHER OS07G0107800 PROTEIN-RELATED 94 169 - -
Acco09g0578 298 Pfam Malectin-like domain 1 93 IPR024788 -
Acco09g0578 298 Gene3D Transferase(Phosphotransferase) domain 1 225 298 - -
Acco09g0578 298 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
Acco09g0578 298 SUPERFAMILY Protein kinase-like (PK-like) 202 298 IPR011009 -
Acco09g0578 298 Pfam Protein kinase domain 233 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0578 298 SUPERFAMILY L domain-like 94 131 - -
Acco09g0578 298 Gene3D Phosphorylase Kinase; domain 1 183 224 - -
Acco09g0578 298 ProSiteProfiles Protein kinase domain profile. 35 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0578 298 Gene3D Ribonuclease Inhibitor 75 142 IPR032675 -
Acco09g0578 298 ProSiteProfiles Leucine-rich repeat profile. 95 118 IPR001611 GO:0005515
Acco09g0578 298 MobiDBLite consensus disorder prediction 173 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0578 Acco-ChrAcco09 8539435 8543267 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0578 202 298 Receptor kinase-like Gene Family AT1G49100 57.983 9.45e-38 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Acco09g0578 Malectin_like 8e-13 CL0202