Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0557 ATGGTAAGCTTGAGAAGGCGCAGACTTTTGGGGCTATGCTCAGGAAACAGTTCCTTTGTTACTCCACTTCCGCTATATTGTGAGAACCTCACTGCTTCTCAAGATTCTGCTCAGACTGCTAAACCTAAGACCGCCCAATGTGACAATGGAATTGGAAGCATGCTACATGGTGTAGGAACTCAACTACTAAAACAGAATCCAATTGTGAAAGAAGAACCAGCTTCCTCAAATGTATCTGGCTCTAGCTCGTCAAAGGAGCAGTCTACTCAGCTCTTTATTGGGCCTCCTATTAAACGCAGAAAGCCACACAGGAGAAAGAATATGCATAGTCAAGAATCATGTGTAATGAGAGGCGTCTACTTTAAAAATATGAAGTGGCAGGCAGCAATTAAAGTGGACAAGAAACAGATCCATCTTGGAACTGTTAATTCTCAAGATGAGGCTGCTCGACTATATGACAGGGCTGCTTTCATGTGTGGGAGGGAGCCCAACTTTGAGCTTTCAGACAAAGAGAAAAAAGAGCTAAGTAAATTGCAATGGGATGAGTTTTTGGCATTTACTCGACAAACAATCACCAGTAAAAAACACAAAAGAAGACTTGGCTCTAGGCTGCGCAGTGAGTCTGAGCCACCTACATCTCATCACGGGGACAGTCAGCTAGGCGTCGATGCCACCTCAGCTTCTGATGATGCTGATCAGGAAACATCAGACTCATGA 717 0.4421 MVSLRRRRLLGLCSGNSSFVTPLPLYCENLTASQDSAQTAKPKTAQCDNGIGSMLHGVGTQLLKQNPIVKEEPASSNVSGSSSSKEQSTQLFIGPPIKRRKPHRRKNMHSQESCVMRGVYFKNMKWQAAIKVDKKQIHLGTVNSQDEAARLYDRAAFMCGREPNFELSDKEKKELSKLQWDEFLAFTRQTITSKKHKRRLGSRLRSESEPPTSHHGDSQLGVDATSASDDADQETSDS 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0557 238 MobiDBLite consensus disorder prediction 70 110 - -
Acco09g0557 238 Gene3D AP2/ERF domain 116 167 IPR036955 GO:0003700|GO:0006355
Acco09g0557 238 MobiDBLite consensus disorder prediction 193 238 - -
Acco09g0557 238 SUPERFAMILY DNA-binding domain 115 160 IPR016177 GO:0003677
Acco09g0557 238 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 104 206 - -
Acco09g0557 238 MobiDBLite consensus disorder prediction 70 91 - -
Acco09g0557 238 MobiDBLite consensus disorder prediction 213 229 - -
Acco09g0557 238 SMART rav1_2 117 172 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0557 Acco-ChrAcco09 8106258 8111449 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0557 49 189 AP2-EREBP Transcription Factor Family AT1G72570 26.994 2.70e-06 45.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco09g0557 None None None