Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0536 ATGCTTCGTTCGTGCGAGAAGTACCGAGTGATGGCCTCCTGTCATCGTCACGCGTGCATGGAACCACACAGAATGCGCCACGTGGAAAACATTTACCGACTTCCTTGGCTCACTTTCCACAACTCCGTTCAGCTCCCAACACAGCGCAACACAGCATCACGACTCTATTCTCTCTGTGATTTATGCTTGCAATTTGCTAAGTTTTGCGCATTTCTCCCATTTCCTGATTTGGAGCTCGGATTGAAGTGGTTAACTATTGATGTTCGTTCCTCAGTTAAAGTTTCTGGGTTGCTGATTCTGCTGGAATCCAAGTCTTCATTAATCGGAGCATCTTCTCTGTTTTATTTTTTACCTCCATTTTCTTCTGCCAAGTGGTATGATTTGGGTGCTGTAATTTCATTACTCAAGATGAGTAATGAGCGTGCTCTCAGAAGTTACCGTCGAAGGAAGGCTGTTTTGGATTTGGATCTTAATAGGGCTCCACCTGAGAATCGGGAGCAAGAAGGCCCTTTGAATCCGCAGGAATCTCATTTAGTTCAAGCTCTTCAGCAACCACAAGTTGTACAGCCTATTGATGTGGAGGCCATTGAGGATGATGTTGTTGAATGTACAGCAAGTGCTTTTGCTGAAGCTAAAAACAATTCAAGAAGAAATCGTGGTAGGACTATAGTTGATGTGGATTTGGATTATCAGAGTTGGATAACTGAAAATGCTACCAACAATTCCAGAAGAGATTCTTTGAACCAAACAATTCTTAATTCTGATGTTTGTATAAACTTGGAAGGCAGTGGCAGTTCTGAGTGGGGGAATGATAAAAAATTGCCTAAACCTCCAATGGAGCCTGTTTTTAGCTGTCCAATATGTATGGGCCCATTTATTGAAGAGGTGTCAACAAGGTGTGGTCATATTTTCTGTAAGAGTTGCATCAAGGCTGCTATAAGTGCACAGGGTAAATGCCCTACATGTAGGAAAAAGGTCACTGCAAAAGAGCTCATCAGGGTGTTTCTACCATCAACTAGTTGA 1023 0.4272 MLRSCEKYRVMASCHRHACMEPHRMRHVENIYRLPWLTFHNSVQLPTQRNTASRLYSLCDLCLQFAKFCAFLPFPDLELGLKWLTIDVRSSVKVSGLLILLESKSSLIGASSLFYFLPPFSSAKWYDLGAVISLLKMSNERALRSYRRRKAVLDLDLNRAPPENREQEGPLNPQESHLVQALQQPQVVQPIDVEAIEDDVVECTASAFAEAKNNSRRNRGRTIVDVDLDYQSWITENATNNSRRDSLNQTILNSDVCINLEGSGSSEWGNDKKLPKPPMEPVFSCPICMGPFIEEVSTRCGHIFCKSCIKAAISAQGKCPTCRKKVTAKELIRVFLPSTS 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0536 340 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 229 339 IPR013083 -
Acco09g0536 340 PANTHER ELFLESS, ISOFORM B 139 340 - -
Acco09g0536 340 ProSiteProfiles Zinc finger RING-type profile. 285 323 IPR001841 -
Acco09g0536 340 SMART ring_2 285 322 IPR001841 -
Acco09g0536 340 ProSitePatterns Zinc finger RING-type signature. 300 309 IPR017907 -
Acco09g0536 340 Pfam Zinc finger, C3HC4 type (RING finger) 285 322 - -
Acco09g0536 340 SUPERFAMILY RING/U-box 278 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0536 Acco-ChrAcco09 7760989 7764548 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0536 135 339 C3H Transcription Factor Family AT5G48655 50.943 2.44e-49 162