Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0532 ATGGCTTTTGCTTCCATGTCACTCCCATTTCAACCCAGAAACCTTCAAGCTTTAATCCTTATCATCTTATACATAAACTTGCTTTGCTTCCAACATATCAGATCTGCATCAAACGACACCGATTATCTGGCATTGCTCAAGTTTAAAGAATCAATAACAGGTGATCCTAAAGAAATATTGAGCTCTTGGAATAGTTCAAACCACTTCTGTAGCTGGACTGGAATCACATGCGGCCACAAGCATCAACGAGTCACCGAGCTGAACCTGAAAGGTTATCATCTCAGTGGAATCATATCGCCCCACGTTGGCAATCTCTCTTTCTTGAGAAATCTCTCCCTCGCTGACAATAGTTTCTATGGAGAAATCCCACCAGAGTTAGGACGTTTGTTCAGATTAAAAGAACTCTCTATGGGGAACAACAGATTAAAAGGAGAGATTCCATGGAACTTGACAAGTTGCACTGAACTAAGGCGTTTGAATTTGTCAATGAACAGTCTTACAGGTAAAATACCGTCCCAGATTGGCTCTCTTTATAAGCTTGAAAGATTTGCCATTCATAACAACAATTTAACAGGGAAACTCCCAAGTTCTCTATGGAATCTATCTTCCTTGCCAAATCTTGACATGGCTTATAATCACTTGGAAGGAAGTATCCCAGAAGAGATAGGTCGTTTGAAGAACTTGAAAATTTTGTCAGCAGTGGCAAATCATTTTTCTGGTGCTCTTCCTCATTCACTTTTCAATATGTCATCTCTCATTATCATATCAGTGACAAATAACCAATTGAACATGACTCGGCTTCCGGATAACATGTTCACCACCCTCCCAAATCTACTATTTGTTGTCATGGGCTTGAATCAAATCTCAGGTCCATTACCAAGTTCCATCACAAATGCATCTTCTCTTCAAGTTTTTGATATTGCTTCTGACTCTTTTGTTGGGCAAGTTCCAAGTCTTGGGGCTCTAAAAGATCTGCGCCTGTTGAATTTGGAAGAAAATAATCTTGGCAGCAATTCAAGTAATGACTTGGATTTCATTACTTCTTTGCAAAACTGTAGTAAACTAGAAAGCTTAGTCCTAGTCAGCAACAACTTTGGAGGTGTTTTACCCAATTCCATAGGAAATTTGACAACCCAACTCATTCGAATTTACCTGGGCAATAATCAGATACATGGAACTATTCCTGAATCTCTAGGGAAGTATACAAATTTAATCACCTTGACTCTGGACATGAACAAATTCTCAGGCACTATTCCATCTTCTTTGGGCAATCTTTATCAGATACAGCTGCTAGCTTTGAGTGTAAACCAACTCTCAGGAGAGATACCAATCTCTATTGGAAATCTCAGCAAATTGGTTACCTTAGACATTTCAGAAAATAGGCTTGAAGGAAAAATCCCTCCTATATTTGCAAGCATGAACTATTTGCTGCACCTTAACCTTGGAAAAAACAATTTCCATGGATCCATACCCAAGCAAATTTTCGGCCTTTCTTCTCTGTCTATTTTGCTGAACTTATCTCACAATTCATTGGATGGCTCTCTGCCGTCTGAGGTTGGAACCCTTCAACACCTCAGCTCTTTGGATATCTCTAAAAACCATCTCTCTGGAGAGATTCCTTCGACCATTGAAGAGTGCACAAGTATGGAATACCTAAACTTAAGAGGGAATTCCTTCAATGGATCCATGCCTTCTTCACTTGCTTCATTGATAAGTCTTGCATATTTAGATATATCATCAAACAACTTGTCTGGACCAATAGTAATTGGTTTACAGAACATTTCGTTTCTTGAATACTTAAATGTTTCTTTCAATATGTTGGATGGTGAGATTCCAACAAAAGGGGTTTTCAGTAATGCAAGTGCAATATCAGTAACTGGAAATAGAAAACTTTGTGGGGGAATCTCTGAGCTGCACCGACCACCTTGCGCCATAAAAGCTAACAAGCAAAAAAGACACCACAATTTAAAGCTTATGGCGATTGTGATTGGCTTGGCTTTTTTTCTTATAGTGATATTTATTCTTTTTTTCTATTGGAGGCAAAAGAGAAGTCGGAAGTTGTCTTTAACAGCGCCAACGATAGAAAAACTTTCCAAGGTATCGTATCAAAATCTGCACATTGCAACTGAAGGCTTCTCTGCCAACAACTTGATTGGATTTGGGAGTTTTGGCTCAGTATATAAAGGAAGGCTGGGATCAAAAGATGATGTTGTTGCAATAAAGGTACTAAACCTTCAGAAGAAGGGAGCTCACAAGAGTTTCATCTCAGAATGTAATGCCCTTAAAAACATAAGGCATCGAAATCTAATTAAAATTATAACATGTTGCTCAAGCATGGATTATAAGGGACAAGAATTTAAAGCTCTAGTGTTTGAGTACATGTCAAATGGAAGCCTCGAAAAATGGTTGCATCCTGATCAAGATAGTATAGATCGATGTTCAATATTGAATCTTATTCAAAGATTTAATATCATATACGAAGTGGCCTATGCAATTTATTATCTTCATCATGAATGTGAGCAACCAATTGTTCATTGTGATTTAAAGCCAAGTAATGTCCTTCTCAATGATGATATGGTAGCTCATGTGAGTGATTTTGAGTTAGCAAGACTTATTTCGACCATTAATGGCACATCTTTCAAACAAACCAGCACATCTGGAATAAAAGGGACTATTGGTTATACTCCTCCAGAGTACGGAATAAATTCTGAAGTTTCAACACAAGGTGATATGTATTCTTTTGGCATCCTTGTTTTGGAAATGCTAACGGGAAAAAGGCCAACCGAAGAAATGTTCAAAGATGGCAACAATCTCCACAGCTATGTCAAATCTGCATATCCAAATAATCTGTTGGAAATTATAGACTCAGCTGTTTTGCCACAACAAATACAACAGACAAGAAGAGCAACAGAAAACGAAATCATCATGGAAAATCTTACACTTTGGCATCCTTATGTTGAGAAGTCTATTCTTTCATTATTTGAGATCGGACTTGCTTGTTCAGCAGAATCACCAAGAGAAAGATTGAACATGATAGATGTCACGAGGGAGCTTAGTCAAATTAGAAGTGCTGTGGAACAATCCAAATAA 3090 0.3799 MAFASMSLPFQPRNLQALILIILYINLLCFQHIRSASNDTDYLALLKFKESITGDPKEILSSWNSSNHFCSWTGITCGHKHQRVTELNLKGYHLSGIISPHVGNLSFLRNLSLADNSFYGEIPPELGRLFRLKELSMGNNRLKGEIPWNLTSCTELRRLNLSMNSLTGKIPSQIGSLYKLERFAIHNNNLTGKLPSSLWNLSSLPNLDMAYNHLEGSIPEEIGRLKNLKILSAVANHFSGALPHSLFNMSSLIIISVTNNQLNMTRLPDNMFTTLPNLLFVVMGLNQISGPLPSSITNASSLQVFDIASDSFVGQVPSLGALKDLRLLNLEENNLGSNSSNDLDFITSLQNCSKLESLVLVSNNFGGVLPNSIGNLTTQLIRIYLGNNQIHGTIPESLGKYTNLITLTLDMNKFSGTIPSSLGNLYQIQLLALSVNQLSGEIPISIGNLSKLVTLDISENRLEGKIPPIFASMNYLLHLNLGKNNFHGSIPKQIFGLSSLSILLNLSHNSLDGSLPSEVGTLQHLSSLDISKNHLSGEIPSTIEECTSMEYLNLRGNSFNGSMPSSLASLISLAYLDISSNNLSGPIVIGLQNISFLEYLNVSFNMLDGEIPTKGVFSNASAISVTGNRKLCGGISELHRPPCAIKANKQKRHHNLKLMAIVIGLAFFLIVIFILFFYWRQKRSRKLSLTAPTIEKLSKVSYQNLHIATEGFSANNLIGFGSFGSVYKGRLGSKDDVVAIKVLNLQKKGAHKSFISECNALKNIRHRNLIKIITCCSSMDYKGQEFKALVFEYMSNGSLEKWLHPDQDSIDRCSILNLIQRFNIIYEVAYAIYYLHHECEQPIVHCDLKPSNVLLNDDMVAHVSDFELARLISTINGTSFKQTSTSGIKGTIGYTPPEYGINSEVSTQGDMYSFGILVLEMLTGKRPTEEMFKDGNNLHSYVKSAYPNNLLEIIDSAVLPQQIQQTRRATENEIIMENLTLWHPYVEKSILSLFEIGLACSAESPRERLNMIDVTRELSQIRSAVEQSK 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0532 1029 ProSitePatterns Protein kinases ATP-binding region signature. 718 741 IPR017441 GO:0005524
Acco09g0532 1029 ProSitePatterns Serine/Threonine protein kinases active-site signature. 843 855 IPR008271 GO:0004672|GO:0006468
Acco09g0532 1029 FunFam LRR receptor-like serine/threonine-protein kinase EFR 683 793 - -
Acco09g0532 1029 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 794 1029 - -
Acco09g0532 1029 SUPERFAMILY Protein kinase-like (PK-like) 687 1018 IPR011009 -
Acco09g0532 1029 Gene3D Ribonuclease Inhibitor 41 151 IPR032675 -
Acco09g0532 1029 Pfam Protein kinase domain 714 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0532 1029 SUPERFAMILY L domain-like 38 335 - -
Acco09g0532 1029 Gene3D Transferase(Phosphotransferase) domain 1 794 1029 - -
Acco09g0532 1029 SMART serkin_6 712 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0532 1029 ProSiteProfiles Protein kinase domain profile. 712 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0532 1029 FunFam Leucine-rich repeat receptor protein kinase EMS1 149 245 - -
Acco09g0532 1029 SUPERFAMILY L domain-like 378 633 - -
Acco09g0532 1029 Gene3D Ribonuclease Inhibitor 152 265 IPR032675 -
Acco09g0532 1029 PANTHER OS04G0122200 PROTEIN 216 1022 - -
Acco09g0532 1029 Gene3D Phosphorylase Kinase; domain 1 676 793 - -
Acco09g0532 1029 Pfam Leucine rich repeat 524 583 IPR001611 GO:0005515
Acco09g0532 1029 Pfam Leucine rich repeat 155 214 IPR001611 GO:0005515
Acco09g0532 1029 FunFam Leucine-rich repeat receptor-like kinase protein FLORAL ORGAN NUMBER1 40 148 - -
Acco09g0532 1029 Coils Coil 1011 1029 - -
Acco09g0532 1029 FunFam LRR receptor-like serine/threonine-protein kinase EFR 341 649 - -
Acco09g0532 1029 Gene3D Ribonuclease Inhibitor 266 642 IPR032675 -
Acco09g0532 1029 Pfam Leucine rich repeat N-terminal domain 39 77 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0532 Acco-ChrAcco09 7680882 7684085 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0532 37 1022 Receptor kinase-like Gene Family AT3G47570 44.990 0.0 842
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Acco09g0532 Pkinase 1.5e-41 CL0016