Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0501 ATGGAAGGTAGCCGGAGGGTGACTCTTTATGATCAAATGTCCTCCGTCGACGGCCGCCGTGACTCGCTTGCCAGTTCGACCCTCGAAGCCATGATGGCAAGCCACAAGATAGCCTCCGAGCCGAGCCGCCGTCATTTCAGCAGCAGCAGCAGCAGCCGAACCCTCTCGGACATAATTCGAGAAGACGATTCCGAAACGAAGGACAAGAAGTTTTGGAAAATCTTCAAAGACAAGCTCTGGCTCAAGCGCGCTGGATCTGCTTGGTTATCCGCAATTCACATCCCGGTCTTGGATATCTCTATCCCTAACCGGAATAACAGCAACCCCGACGCTCCGTCCACAAGTAACCTGCCCGAATTCTCAGGTCAGATCTTAACCACAGCGCGATCTTCCCTCGGCGCCGCCTTCTCCGGCGAGCCAACACACCAAACTTCTCGCCCCGATTCCTTCCGTCGAGACGGCTCGTTAACTTTCCAGGACTACTTAGACAGCGACGGCTCCGGATCCGAGTGCGACGATTGGGATCCTGCGCGTGAAGGTACGCGCCGCCTGTCCACAATTTTATCAGAGGAGAGAGCATTGTCTGCGAGGGAGGCCGAGGCTGCTGCCGCTGCATCATCGGCGGCGGAGGCACTGGGGGAAGACGAGCCGGTGAGGATGTCACTGACGCTGATGGATTTACTGGAGGAGACAGATAGGCAAATGGGGTTGGATGCGCAATACAGTACAGGATATGAAGTCGCCGATGAAGAAGCGCACAAGAGGATAAAAATAGACGAGGAAGAAGAAGAAGAAAGCAAATGGAGCGTGCAGGAAAATTGTTGCGTGTGTATGGTGAGGCATAAAGGAGCAGCGTTTATACCATGTGGACATACATTTTGCAGGCAATGTTCCAGAGAGCTTTGGGTGAGTAGAGGCCATTGTCCACTCTGCAACAATGTTATTCTGGAAATTCTTGACTTGTTCTGA 969 0.5325 MEGSRRVTLYDQMSSVDGRRDSLASSTLEAMMASHKIASEPSRRHFSSSSSSRTLSDIIREDDSETKDKKFWKIFKDKLWLKRAGSAWLSAIHIPVLDISIPNRNNSNPDAPSTSNLPEFSGQILTTARSSLGAAFSGEPTHQTSRPDSFRRDGSLTFQDYLDSDGSGSECDDWDPAREGTRRLSTILSEERALSAREAEAAAAASSAAEALGEDEPVRMSLTLMDLLEETDRQMGLDAQYSTGYEVADEEAHKRIKIDEEEEEESKWSVQENCCVCMVRHKGAAFIPCGHTFCRQCSRELWVSRGHCPLCNNVILEILDLF 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0501 322 Pfam Zinc finger, C3HC4 type (RING finger) 271 316 - -
Acco09g0501 322 ProSiteProfiles Zinc finger RING-type profile. 274 312 IPR001841 -
Acco09g0501 322 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 248 322 IPR013083 -
Acco09g0501 322 SMART ring_2 274 311 IPR001841 -
Acco09g0501 322 MobiDBLite consensus disorder prediction 34 56 - -
Acco09g0501 322 CDD RING-HC 274 311 - -
Acco09g0501 322 PANTHER OS01G0917900 PROTEIN 19 322 - -
Acco09g0501 322 SUPERFAMILY RING/U-box 258 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0501 Acco-ChrAcco09 6748029 6748997 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0501 6 322 C3H Transcription Factor Family AT3G25030 39.385 4.35e-58 186