Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0496 ATGGCCTCGCCTCCCTCACCTAAACCCTTCTCCCCAGTCGCCACCACCGCCTCACCCACCAAGAAGCCCCAATCAACTCCGTGGACTCATCAAGAAACAATCAATCTCATCCAAGCCTATCAAGATAAATGGTATTCTCTCAAGCGAGGTCCTCTCAAGGCCAACCAATGGGAAGAGGTCGCCGTCACCGTCGCCGTTCGGTGCGGCTATGACTACAATGAGCCTTCCAAGACCGCCGTCCAGTGTCGCCACAAGATGGAAAAGCTTCGTCAACGTTATCGTGCCGAGAACCACCGTCTCGCAGCTTCCTCCTCCTCCTTTGGCAGCCGCTATTGGCAATACTTTGACCTCATGGACCAATTGGAGAAAGGCCCTATGCCTATTTCTGCTCAACCCCTTGTGGCTCTCATGCCCTTTGATTATGATGATAACGAAGAGGAAAATGACGGTGATGATAGTGATGATTATGATAAATATAATGACATTGATGGAAGACGGCAATATAGCCAGTCAAGGAGTACTCATTATTTTCTCAGCAGCCAGCGACATGAAAGTAGATATAGACCTGAAAGTAGATATAGAGGAGTTTCTGAATTTTCTCGGGAGCAAGTAGCTAAGAGGCTACGGAGGGTCTCTAAGGAGGAGGAAGAGAATGTTGAGGAGGTAAATGGTGAGAGAATGGTGGCAGGAATTGGGTTGGTTTCTGGGTTAGCTGCTGAGATGAAGGCATTTGCGGAAAGGTTCATTGATATAGAGAATTTGAAGATGGAAATGATGAAGGAAACTGAGAGGTGTAGGTTGGAGATGGAGAATAAGCGGATTGAGATGATTGTAAAATCGCAGCAGAGAATTGTTGATTCCATTGGGAAGGCTTTCGGGTTCCCTAAGAAGATGAAGATAAGTCCTGAAATCTAA 915 0.4699 MASPPSPKPFSPVATTASPTKKPQSTPWTHQETINLIQAYQDKWYSLKRGPLKANQWEEVAVTVAVRCGYDYNEPSKTAVQCRHKMEKLRQRYRAENHRLAASSSSFGSRYWQYFDLMDQLEKGPMPISAQPLVALMPFDYDDNEEENDGDDSDDYDKYNDIDGRRQYSQSRSTHYFLSSQRHESRYRPESRYRGVSEFSREQVAKRLRRVSKEEEENVEEVNGERMVAGIGLVSGLAAEMKAFAERFIDIENLKMEMMKETERCRLEMENKRIEMIVKSQQRIVDSIGKAFGFPKKMKISPEI 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0496 304 Pfam Myb/SANT-like DNA-binding domain 26 121 IPR044822 -
Acco09g0496 304 SMART 118neu2 35 126 IPR006578 -
Acco09g0496 304 MobiDBLite consensus disorder prediction 13 29 - -
Acco09g0496 304 Gene3D - 28 95 - -
Acco09g0496 304 Coils Coil 251 271 - -
Acco09g0496 304 MobiDBLite consensus disorder prediction 1 29 - -
Acco09g0496 304 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 12 288 IPR044823 -
Acco09g0496 304 ProSiteProfiles Myb-like domain profile. 20 90 IPR001005 -
Acco09g0496 304 MobiDBLite consensus disorder prediction 141 183 - -
Acco09g0496 304 Coils Coil 205 225 - -
Acco09g0496 304 MobiDBLite consensus disorder prediction 141 157 - -
Acco09g0496 304 FunFam Trihelix transcription factor ASIL2 28 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0496 Acco-ChrAcco09 6694530 6695444 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0496 28 121 Trihelix Transcription Factor Family AT3G14180 34.043 1.31e-12 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Acco09g0496 Myb_DNA-bind_4 6e-18 CL0123