Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0486 ATGTCTGTTCGACTCAAGGATCCTGTATTCTCTGCTTCTTCTTCTTCTTCACTTTCTTCATGGAACCACAGGCCCAACAACAACGACCATACTTTCCCTCTTCACAAGTCCAGCAAAATCGAAGAAAGTGATGAAGATCTGTTCAGGGTGCCGGACATGGAAGCGGCCGGCGGTGGAGAGTGTGGCGGAGGAGGAGAGGCTGTGGGTTCGAATGGGAATGCGAAGGCAGCGCCAAGCTTAAGCAATGTGACAGCGACAGCGACAGCGACAGATTCTCACTTTCAGAGTGGAAAACGAAGAAGAGGAAGAAACCCTGCAGATAAAGAGTGCAGACGGCTCAAGAGGTTGTTGAGGAATAGAGTATCAGCGCAGCAAGCAAGAGAGAGGAAGAAAGTGTATGTGAATGAGTTGGAAGGAAGAGCAAAGGAGTTGCAAGACAAGAATTCCAAGTTGAAAGAACGTATCTCTACTTTGATCAATGAGAACACCATGCTTCGCAAGGTTCTTATGAACACAAGGCCTAAAGTTGATGAAAGCAGTGAACCAAAGCAGGATCAATTAAGTAAAAGCTAA 573 0.466 MSVRLKDPVFSASSSSSLSSWNHRPNNNDHTFPLHKSSKIEESDEDLFRVPDMEAAGGGECGGGGEAVGSNGNAKAAPSLSNVTATATATDSHFQSGKRRRGRNPADKECRRLKRLLRNRVSAQQARERKKVYVNELEGRAKELQDKNSKLKERISTLINENTMLRKVLMNTRPKVDESSEPKQDQLSKS 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0486 190 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 114 129 IPR004827 GO:0003700|GO:0006355
Acco09g0486 190 MobiDBLite consensus disorder prediction 34 51 - -
Acco09g0486 190 Coils Coil 127 161 - -
Acco09g0486 190 MobiDBLite consensus disorder prediction 1 108 - -
Acco09g0486 190 SMART brlzneu 107 171 IPR004827 GO:0003700|GO:0006355
Acco09g0486 190 CDD bZIP_HY5-like 121 162 - -
Acco09g0486 190 MobiDBLite consensus disorder prediction 94 108 - -
Acco09g0486 190 MobiDBLite consensus disorder prediction 74 93 - -
Acco09g0486 190 SUPERFAMILY Leucine zipper domain 111 170 IPR046347 GO:0003700|GO:0006355
Acco09g0486 190 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 11 186 IPR044280 GO:0000981|GO:0045944
Acco09g0486 190 MobiDBLite consensus disorder prediction 7 33 - -
Acco09g0486 190 Pfam bZIP transcription factor 108 167 IPR004827 GO:0003700|GO:0006355
Acco09g0486 190 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 109 172 IPR004827 GO:0003700|GO:0006355
Acco09g0486 190 MobiDBLite consensus disorder prediction 171 190 - -
Acco09g0486 190 Gene3D Single helix bin 130 171 - -
Acco09g0486 190 FunFam Transcription factor HY5 130 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0486 Acco-ChrAcco09 6486996 6489183 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0486 90 179 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 71.111 1.54e-39 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Acco09g0486 bZIP_1 3.5e-13 CL0018