Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0470 ATGACCGCACGTGATGCCGAAGTTTTTCAGCTATGTTCCAAGAAAGAAGAAAGGAAAGGTACACAGCAGGCGAAGAATGAAATTCTGGGCCTCGGGGATAGCAACATCCCGTGCTTCTTCACCACCAAAACCACTCACTTCCATTGCTACTCCCTCACCAACTCCTTCTCTTCTTCTTCTTCTTCCTTCATCTTCTTCTTCTTCTTCACCTCTTCAATGGGCAATTGTGGCACCAGAGAGGAATCGGCTGTTGTCTCCAATGCTCAAGTTCAACAGCTGCACTTGTCGTCTTTGACTGCTAAAAGTGCTGCCGGTGAGAAGAAGCATAATCGGTCTGTGTCAGATCTGAGTGACATTTCTACCCCGCGCCATAACTTCGAGGATGCTAGGAAGAATACACTACTTTATACTCATGTTATTGCATTTACATTGTATGAGCTCGAGACTATTACTAAGAGTTTTCGCTCCGATTATATCCTTGGAGAAGGGGGGTTCGGTACTGTCTATAAAGGTTACATTGACGAGAATGTGAGAGTTGGACTCAAATCCCTTCCTGTTGCTGTCAAGGTTCTAAACAAAGAGGGTCTTCAGGGACATCGCGAGTGGCTTACAGAAGTCAATTTCCTGGGGCAGCTCAGGCATCCTAATTTGGTTAAGTTGATCGGATACTGCTGTGAGGACGATCACAGGCTACTTGTATACGAGTTCATGTTTCGAGGAAGTTTAGAGAATCATCTATTCCGAAAGGCAACTGTTCCTTTATCATGGGCTACAAGAATGATGATTGCGCTTGGGGCTGCCAAGGGGCTTGCTTTTCTTCATAATGCTGAAAGGCCAGTAATCTATCGAGACTTCAAAACTTCTAATATATTGTTGGACTCTGATTATACAGCTAAGCTTTCTGATTTTGGACTGGCAAAAGCTGGACCACAAGGTGATGAAACCCATGTGTCCACCAGGGTTATGGGCACTTATGGATATGCTGCTCCTGAATATGTAATGACTGGCCACCTGACTGCAAGGAGTGATGTGTATAGCTTTGGAGTTGTTCTTTTGGAACTCTTAACCGGAAGGAAATCTGTTGACAAAACAAGACCGGGTAAGGAACAGAGCCTAGTGGATTGGGCTAGACCAAAGCTTAATGACAAGAGAAAGCTCCTGCAGATACTTGATCCTAGATTGGAAAGCCAATACTCAGTGAGGGCAGCACAGAAAGCATGTAGCTTGGCTTACTACTGTTTAAGTCAAAATCCCAAAGCCAGGCCGCTAATGAGTGATGTAGTTGAGACATTGGAACCTTTACAAAGTTGTAGTGATGGTGCTGGTGAAGTCTCATCATTGGGATCAAGTAATGGAGGTGGTGGTCCCTTTGCCATGAGTGGAATCTCTGACTACCGGATGCGCCAGAGGTTTTCAAACAATGTTGGTCCAGGTGCTACTTGTCGGTCTCCGAACCCAAACTGCTCACCCAGCGCAGCCACAGCGTGCCGGGTCAGATGA 1500 0.458 MTARDAEVFQLCSKKEERKGTQQAKNEILGLGDSNIPCFFTTKTTHFHCYSLTNSFSSSSSSFIFFFFFTSSMGNCGTREESAVVSNAQVQQLHLSSLTAKSAAGEKKHNRSVSDLSDISTPRHNFEDARKNTLLYTHVIAFTLYELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIALGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPGKEQSLVDWARPKLNDKRKLLQILDPRLESQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSCSDGAGEVSSLGSSNGGGGPFAMSGISDYRMRQRFSNNVGPGATCRSPNPNCSPSAATACRVR 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0470 499 Gene3D Transferase(Phosphotransferase) domain 1 237 444 - -
Acco09g0470 499 SUPERFAMILY Protein kinase-like (PK-like) 131 432 IPR011009 -
Acco09g0470 499 FunFam Serine/threonine-protein kinase BIK1 120 236 - -
Acco09g0470 499 PANTHER OS01G0588500 PROTEIN-RELATED 106 435 - -
Acco09g0470 499 ProSitePatterns Protein kinases ATP-binding region signature. 160 189 IPR017441 GO:0005524
Acco09g0470 499 FunFam Probable serine/threonine-protein kinase PBL8 237 449 - -
Acco09g0470 499 Gene3D Phosphorylase Kinase; domain 1 99 236 - -
Acco09g0470 499 ProSiteProfiles Protein kinase domain profile. 154 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0470 499 CDD STKc_IRAK 160 434 - -
Acco09g0470 499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 280 292 IPR008271 GO:0004672|GO:0006468
Acco09g0470 499 Pfam Protein tyrosine and serine/threonine kinase 159 431 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0470 Acco-ChrAcco09 6332850 6337915 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0470 142 441 Glycoside Hydrolase AT3G07070 54.125 7.54e-109 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Acco09g0470 PK_Tyr_Ser-Thr 7.8e-48 CL0016