Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0447 ATGGATGATGCTGGGCATCGTGAAAATGGAAGGCACAAAGCTGACCAGTATAAATCAGCTCAGGGGCAGTGGTTGATGCAACATCAACCTTCCATGAAGCAAATTATGGCAATCATGGCCGAAAGAGATGCAGCCATGCAAGAGAGAAACCTAGCCCTTTCTGAAAAAAAGGCAGCCCTTGCAGAGCGTGATATGGCATTCTTGCAGCGAGACACTGCCATTGCAGAACGGAATAATGCCATTATGGAACGAGATAATGCAATTGCTACCCTTCAGTATCGTGAGAACTCCTTAGCCAATGGTAGCATGTCTTCTTGTCCTCCAGGATGCCAAATTGCCCGAGGTGTCAAGCATGTGCATCATCCTCAGCAACAAGTACACCATTTACCTCACATGGGTGATACTTCTTACAGCACACGGGAAATGCACACTGGTGATGACCTTCCATCAGCATCCATGCCTAATGAAGCCGGGAAATCACAGCGGGCCAAGCGACCAAAGGATGGTAAGTCAGTTTCACCTAGCAAGAAGACACCAAGAGCTGCAAAAAAAGTCAAGAGGGAGGGTGAAGACTTAAACAAGATGGTGTTTGGCAAGGCGCATGAGTGGAAGAGTGGTCAGGAAATGGTTAATGGAGGTGATGATCTTAACAAGCAGTTAGGGTCATCAAAGGCAGATTGGAAAGGTCAAGACTTGGGGTTGAACCAGGTAGTATATGATGAGTCAACAATGCCAGCACCTGTATGCTCTTGTACTGGTGTTCTGAGACAGTGCTACAAATGGGGGAATGGGGGCTGGCAGTCTGCTTGTTGCACAACAACTCTATCAATGTATCCACTTCCAGCAGTACCCAACAAGAGACATGCTAGGGTTGGTGGACGAAAGATGAGTGGAGGTGCTTTCAATAAGCTGCTTAGCCGGCTTGCAGCAGAGGGCCATGATCTGTCAAACCCAGTTGACCTGAAGGACAACTGGGCCAAACATGGCACAAACCGCTATATCACGATCAAGTAG 1014 0.4783 MDDAGHRENGRHKADQYKSAQGQWLMQHQPSMKQIMAIMAERDAAMQERNLALSEKKAALAERDMAFLQRDTAIAERNNAIMERDNAIATLQYRENSLANGSMSSCPPGCQIARGVKHVHHPQQQVHHLPHMGDTSYSTREMHTGDDLPSASMPNEAGKSQRAKRPKDGKSVSPSKKTPRAAKKVKREGEDLNKMVFGKAHEWKSGQEMVNGGDDLNKQLGSSKADWKGQDLGLNQVVYDESTMPAPVCSCTGVLRQCYKWGNGGWQSACCTTTLSMYPLPAVPNKRHARVGGRKMSGGAFNKLLSRLAAEGHDLSNPVDLKDNWAKHGTNRYITIK 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0447 337 MobiDBLite consensus disorder prediction 1 21 - -
Acco09g0447 337 Pfam GAGA binding protein-like family 1 337 IPR010409 -
Acco09g0447 337 MobiDBLite consensus disorder prediction 1 15 - -
Acco09g0447 337 SMART GAGA_bind_2 1 337 IPR010409 -
Acco09g0447 337 MobiDBLite consensus disorder prediction 160 174 - -
Acco09g0447 337 PANTHER - 1 337 IPR010409 -
Acco09g0447 337 MobiDBLite consensus disorder prediction 120 189 - -
Acco09g0447 337 Coils Coil 51 71 - -
Acco09g0447 337 MobiDBLite consensus disorder prediction 129 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0447 Acco-ChrAcco09 6054674 6055824 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0447 65 337 BBR or BPC Transcription factor family AT5G42520 63.699 6.99e-120 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Acco09g0447 GAGA_bind 3.8e-106 No_clan