Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0441 ATGGGTTATGGACTTAAGGTTTCGAGACCGACAAGATCACATCGTTGGCCACGGCCGCCGCATCTACTAACCGCGTTACTTGCTAAACCCACGCGCTGGATTGGCGCGTTTTACTCACTCCTTGGCGTCCCTTTTGGGACCTATCTGTACATTGATATTGGGATGCTGGGTCCGAGATTATATGGATTTGGCCTGTTTTTTTCGTTTTTCTGTTTCATCCTCACAGCAGCAGCACAAAAGACATTTCCTTCGGAAGTGCAAGCACTGGTCCAAATCAAGAAAAGTTTGATTGATCCGAAGAACCATCTGAAGAACTGGAATAAGGGTGACCCTTGTTCATCAAACTGGACTGGTGTCTGGTGTTTTAATAGGGTTGAGACTGATGGATACTTCCACGTCCATGAGCTTTACTTAATGACTTCGAATCTCTCGGGAAGTCTAGCACCTCAGCTTGGTCAGCTATCGCAGCTTCAAATAATGAATTTCATGTGGAATGATCTGACGGGAACCATACCAAAGGAGATTGGGAATATCAAATCTTTGAGACTCTTACTCCTGAATGGCAATAAGTTATCTGGTTCTTTGCCCGATGAACTTGGCAATCTCTTAAACTTGAATAGACTCCAACTTGACCAAAACCAACTGTCAGGTTCAATACCACAATCGTTTACCAACTTGATCAATGTTAAACATCTCCACTTGAACAATAACTCATTTTCTGGTCGAATTCCTCCTGAACTTTCAAAGCTACCCAATCTATTGCATTTGCTTGTTGACAATAACAACTTTTCTGGCCATCTTCCACCAGAATTTTCCATGCTACCAGCGTTGCGCATACTCCAAGTCGATAACAATAATTTCAGTGGAACAGAAATTCCTTCTACATATGCAAACTTTTCCAAGCTAGTAAAACTAAGTCTTAGAAACTGCAGCTTGCAAGGAGCTGTTCCTGATCTGAGTTTGATAACCGAGCTTACCTATTTGGATCTTAGCTGGAATCATCTTACTGGACCCATACCATCAAAGAAACTTTCAGATAATATGACAACTATTGACCTATCAAATAACAGGATCAACGGATCTATTGCTGGAGGCATCAAATTACTTCCTGTACTTCAAAGATTGTCACTAGAGAACAATTCTTTGTCTGGATCCATCCCTGCCAGTATATGGCTGAACTTCACTAGGAGTGCAAAGCTCACAATTGATCTCCGCAATAACTCATTTTCAGACATTTCAGGCAGTTCAAGAGTACCAGCAAATGTCACCTTGAGGCTTTCTGGCAATCCTATCTGCAAGGATTCTAACATTCAAAATATTGGTCATTATTGTGCCTCTGGAGGGGTTGAATCTGAAAAATCTATCAATTCCACAACTGCATGTCCTGCTCAAGCTTGTCCAGCAAATGATTTCTATGAATATGTCCCAGATTCCCTTGTTCCCTGCTATTGTGCAGCACCCCTGAGAATTGGATATCGTCTGAAAAGCCCAAGTTTCTCTTACTTTTCTCCTTCTATAACTTATTTTGAGTTATATCTGACTCAAACTTTACATTTGGACCGACACCAAGTATGGATAGACTCAGTTGCTTGGGAAGTAGGACCTCGTCTTAGGATGTATTTGAAAATTTATCCTAATTACAATGATTCCCACTCTAATAAGTTCAATACAAGTGAGGTTCGGCGTATTCAAGGACAATTTGTATCATGGGATTTTCCTCGCACTGATTTTTTTGGACCATATGAACTCCTGAACTTTACTCTCCTTGGACCTTATGAAGAGGTGATTGTTGAGACAAACAAGGGGAAGATCAGTACAACCGTGTTAGTAGTTTCCATTATTGCAGCTATTGCTTGTGCTGTCACAATCTCTGTGATCGTCACTCTTGTGATAGCCAAAAGACATATCAAATACCGTCCCAAGCTATCCAGGAATCATATATCCTCTAATATTTCCATCAAAATTGATGGTGTGAAAGCATTCACTTTCAAAGAACTGGCTCATGCAACTGACAATTTCAGCAGTTCAACTATAGTTGGCCAAGGAGGTTATGGGAAGGTTTATAAAGGCATTCTGTCTGATAAAACAGTTGTGGCTGTAAAGCGAGTAGATGAAGGTTCTTTACAAGGCCAAAAAGAATTTTTGACTGAGATTGAACTTCTATCAAGGTTACATCATCGAAATCTAGTCTCATTGGTCGGATACTGTCATGAAGAAGGAGAGCAGATTCTGGTTTACGAGTTCATGCCTAATGGTACCTTGCGGGAGTGGATTTCTGGTAAAAGAAAGGGAAACCTAAACTTTGGTATGAGGATGAGGATTTCAATGGGTGCCGCCAAGGGCATACTGTATCTCCATACCGAGGCTAACCCTCCCATATTCCACCGAGATATTAAAGCTAGCAACATACTTCTGAACCGCATGCTGGTTGCTAAAGTTTCTGACTTTGGACTCTCACGACTTGCACCAAATATGGATGATGAAGGAAACACACCTAAATATGTGTCGACAGTTGTGAGGGGAACACCAGGATACTTAGATCCGGAGTATTTTTTGACTCATAAGTTAACGGACAAAAGTGATGTTTATAGCTTGGGAATTGTGTTTCTGGAGCTTTTGACAGGCATGCATCCAATATCACATGGGAAAAACATTGTTCGTGAGGTTAATGAGGCGCGTCACTGTGGCACGATATCTTCCATTATAGATAGCAGTATGGGTCCGTATCCATCAGATTGTGTGGACAAGTTTCTAAATCTTTCCCTCAGTTGTTGCCATGAGAATCCAGAGGAGAGACCAGGCATGATAGATGTGGTGAAGGAGCTGGAGATTATTCTCTCAATGTTGCCTGATTCTGAAACTGCTTTCCCAGACGGTGCATATGATTTTTCTGTCCAAATGGCTTCATCATCATCAACATCATCAAAATCCTACGTGGCAAGGGACGGCCAAAACATGTCCTCTCCTATGTTGTCAGGAAGCAACCTTGTCAGTGATGTTATTCCCACCATTGTTCCTCGTTAA 3024 0.4153 MGYGLKVSRPTRSHRWPRPPHLLTALLAKPTRWIGAFYSLLGVPFGTYLYIDIGMLGPRLYGFGLFFSFFCFILTAAAQKTFPSEVQALVQIKKSLIDPKNHLKNWNKGDPCSSNWTGVWCFNRVETDGYFHVHELYLMTSNLSGSLAPQLGQLSQLQIMNFMWNDLTGTIPKEIGNIKSLRLLLLNGNKLSGSLPDELGNLLNLNRLQLDQNQLSGSIPQSFTNLINVKHLHLNNNSFSGRIPPELSKLPNLLHLLVDNNNFSGHLPPEFSMLPALRILQVDNNNFSGTEIPSTYANFSKLVKLSLRNCSLQGAVPDLSLITELTYLDLSWNHLTGPIPSKKLSDNMTTIDLSNNRINGSIAGGIKLLPVLQRLSLENNSLSGSIPASIWLNFTRSAKLTIDLRNNSFSDISGSSRVPANVTLRLSGNPICKDSNIQNIGHYCASGGVESEKSINSTTACPAQACPANDFYEYVPDSLVPCYCAAPLRIGYRLKSPSFSYFSPSITYFELYLTQTLHLDRHQVWIDSVAWEVGPRLRMYLKIYPNYNDSHSNKFNTSEVRRIQGQFVSWDFPRTDFFGPYELLNFTLLGPYEEVIVETNKGKISTTVLVVSIIAAIACAVTISVIVTLVIAKRHIKYRPKLSRNHISSNISIKIDGVKAFTFKELAHATDNFSSSTIVGQGGYGKVYKGILSDKTVVAVKRVDEGSLQGQKEFLTEIELLSRLHHRNLVSLVGYCHEEGEQILVYEFMPNGTLREWISGKRKGNLNFGMRMRISMGAAKGILYLHTEANPPIFHRDIKASNILLNRMLVAKVSDFGLSRLAPNMDDEGNTPKYVSTVVRGTPGYLDPEYFLTHKLTDKSDVYSLGIVFLELLTGMHPISHGKNIVREVNEARHCGTISSIIDSSMGPYPSDCVDKFLNLSLSCCHENPEERPGMIDVVKELEIILSMLPDSETAFPDGAYDFSVQMASSSSTSSKSYVARDGQNMSSPMLSGSNLVSDVIPTIVPR 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0441 1007 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 83 244 - -
Acco09g0441 1007 SMART serkin_6 673 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0441 1007 Gene3D Ribonuclease Inhibitor 82 243 IPR032675 -
Acco09g0441 1007 Gene3D Phosphorylase Kinase; domain 1 644 748 - -
Acco09g0441 1007 Gene3D Ribonuclease Inhibitor 342 464 IPR032675 -
Acco09g0441 1007 PANTHER RECEPTOR-LIKE PROTEIN 55 92 947 - -
Acco09g0441 1007 SUPERFAMILY L domain-like 98 440 - -
Acco09g0441 1007 CDD STKc_IRAK 679 945 - -
Acco09g0441 1007 SUPERFAMILY Protein kinase-like (PK-like) 658 970 IPR011009 -
Acco09g0441 1007 ProSiteProfiles Protein kinase domain profile. 673 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0441 1007 Gene3D Transferase(Phosphotransferase) domain 1 749 955 - -
Acco09g0441 1007 Pfam Protein kinase domain 675 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0441 1007 Pfam Leucine rich repeat N-terminal domain 84 121 IPR013210 -
Acco09g0441 1007 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 749 957 - -
Acco09g0441 1007 SMART LRR_typ_2 178 201 IPR003591 -
Acco09g0441 1007 SMART LRR_typ_2 226 249 IPR003591 -
Acco09g0441 1007 SMART LRR_typ_2 369 393 IPR003591 -
Acco09g0441 1007 SMART LRR_typ_2 202 225 IPR003591 -
Acco09g0441 1007 SMART LRR_typ_2 250 273 IPR003591 -
Acco09g0441 1007 SMART LRR_typ_2 274 298 IPR003591 -
Acco09g0441 1007 FunFam Leucine-rich repeat protein kinase family protein 637 748 - -
Acco09g0441 1007 Gene3D Ribonuclease Inhibitor 244 341 IPR032675 -
Acco09g0441 1007 ProSitePatterns Serine/Threonine protein kinases active-site signature. 793 805 IPR008271 GO:0004672|GO:0006468
Acco09g0441 1007 ProSitePatterns Protein kinases ATP-binding region signature. 679 701 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0441 Acco-ChrAcco09 5991979 6003536 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0441 59 954 Receptor kinase-like Gene Family AT5G01950 61.197 0.0 1100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Acco09g0441 Pkinase 3.9e-48 CL0016