Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0440 ATGTCAAAGAAAAATCAGTTACCTTTTTGTCTACGTAAAATTAACGTTGATGTTGTAATTGTTGAGACACGTAATGGGAAGATTAGTACAACCCTGTTAGTAGTTGCCACTATTGCAGCTATTGCTTGTGCTGTCACGATCTCTGCAATTGTCACTCTCGTGATAGCCAACAGATATATAAAATACCATCCCAAGCTATCCAGGAATCATATGTCCTCTAATTTTTCCATCAAAATTGATGGTGTGAAGGCATTCACTTTCAAAGAACTGGCTCATGCAACTGGCAATTTCAGCAGTTCAACTGTAGTAGGCCAAGGAGGTTATGGGAAGGTTTATAAAGGCACTCTGTTTGATGAAACAGTTGTGGCTGTAAAGCGAATAGATGAAGGCTCTTTACAAGGCCAAAAAGAATTTTTGACTGAGATTGAACTTCTATCAAGGTTACATCATCGAAATCTAGTCTCATTGGTCGGATACTGTCATGAAGAAGGAGAGCAAATTCTGGTTTATGAGTTCATGCCTAATGGTAGCTTGCGGGAGTGGATTTCTGGTAAAAGGAAGGGAAACCTAAACTTTGGCATGAGGATGAGGATTGCAATGAGTGCCGCCAAGGGCATACTGTATCTCCATACCGAGGCTAACCCTCCCATAATCCACCGAGATATTAAATCTAGCAACATACTTCTGGACTGCATGCTGGTTGCTAAGGTATCTGACTTTGGACTCTCACGACTTGCACCGAATATGGATGACAAATATGTGTCAACAGTTTTGAGGGGAACACCATGTCATGAGATTGTTCTGGCTGGTAAACTCCTTCCCTTAGTTTTTATTCTACTCGTTAATGAGGCGCGTCAGTGTGGCGTGATATCTTCCATTATAGATAGCAATACGGGTTTATATCCATCAGATTGTGTGAACAAGTTTCTAAATATTTCCCTCAGTTGTTGCCATGAGAATCCAGAGGAGAGACCAGGCATGATAGATGTGGTGAGGGAGCTGGAGATTATTCTCTCAATGTTGCCTGATTCTGAAACTTCTGTCCCAGACATTGCAAATGATGTTTCTGTCCAAATGGCTTCATCATCAATTCATCATCAACATCATCGAAATCTTACATGGCAAGGGACGACCGAAGCATATCCTCTCCTATGTTGTCAGGAAGCAACCTTGTCAGTGATATTATCCCCACCATTGGAGAGGAAGGAGTTGCTGAAAGGATCTTACAGGGACAGACACTTCAATGCTGGATCCATTCTTTTGGGATTTGGAGTGCTTGAATCAGTTGTAGTTCTTTCATTTATGTGTGCTGATGCATTTAGTAAGTTCCTTCCATTCTGTAAGGGATTTGCAGCTGGATGTATGATCTGGATGGTTGTTGCAGAAGTGCTCCCTGATGCATTCAAGGAAGCCTCTGCTTCACAGGTTGCTTCAGCAGGAAACCTTTTTGTAGCATTTATGCAAGTTCTCACCACCCTTTTTCAAAATTTCAGCCACCACTAA 1503 0.4172 MSKKNQLPFCLRKINVDVVIVETRNGKISTTLLVVATIAAIACAVTISAIVTLVIANRYIKYHPKLSRNHMSSNFSIKIDGVKAFTFKELAHATGNFSSSTVVGQGGYGKVYKGTLFDETVVAVKRIDEGSLQGQKEFLTEIELLSRLHHRNLVSLVGYCHEEGEQILVYEFMPNGSLREWISGKRKGNLNFGMRMRIAMSAAKGILYLHTEANPPIIHRDIKSSNILLDCMLVAKVSDFGLSRLAPNMDDKYVSTVLRGTPCHEIVLAGKLLPLVFILLVNEARQCGVISSIIDSNTGLYPSDCVNKFLNISLSCCHENPEERPGMIDVVRELEIILSMLPDSETSVPDIANDVSVQMASSSIHHQHHRNLTWQGTTEAYPLLCCQEATLSVILSPPLERKELLKGSYRDRHFNAGSILLGFGVLESVVVLSFMCADAFSKFLPFCKGFAAGCMIWMVVAEVLPDAFKEASASQVASAGNLFVAFMQVLTTLFQNFSHH 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0440 500 FunFam Leucine-rich repeat protein kinase family protein 61 172 - -
Acco09g0440 500 SUPERFAMILY Protein kinase-like (PK-like) 82 365 IPR011009 -
Acco09g0440 500 SMART serkin_6 97 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0440 500 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 25 261 - -
Acco09g0440 500 Gene3D Phosphorylase Kinase; domain 1 68 172 - -
Acco09g0440 500 ProSitePatterns Protein kinases ATP-binding region signature. 103 125 IPR017441 GO:0005524
Acco09g0440 500 Gene3D Transferase(Phosphotransferase) domain 1 173 265 - -
Acco09g0440 500 Gene3D Transferase(Phosphotransferase) domain 1 271 355 - -
Acco09g0440 500 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Acco09g0440 500 Pfam Protein tyrosine and serine/threonine kinase 101 256 IPR001245 GO:0004672|GO:0006468
Acco09g0440 500 ProSiteProfiles Protein kinase domain profile. 97 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0440 Acco-ChrAcco09 5976561 5982311 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0440 54 348 Receptor kinase-like Gene Family AT5G01950 54.434 7.81e-103 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Acco09g0440 PK_Tyr_Ser-Thr 5.3e-35 CL0016