Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0438 ATGAGCAAGTTCCTACCCACTCCGTTACCTGCATTGACTATTGGACTTCAAACTGTGAGCGTTTCAAGCCCCCACTTGGTTATTTTTACTCATTGTATTCGTCTGAATTCTCGGGATATTGGGATGTTGGGTCCGAGATTACATGGATTTGGCCTGGTTTTTTCGTTTTTCTGTTTCATCCTCACAGCAGCAGCACAAAAGACATTTCCTTCGGAAGTGCAAGCACTGGTCCAAATCAAGAAAAGTTTGATTGATCCGAAGAACCATCTGAGAAACTGGAACAAGGGCGACCCTTGTGCATCAAACTGGACCGGTGTCTGGTGTTTTAATGGGGTTGAGACTGATGGATACTTCCATGTCTGTGAGCTTTACTTAATGACTTCAAATCTCTCGGGAAGTCTAGCACCTCAGCTTGGTCAGCTATCACAGCTTAAAATAATGAATTTCATGTGGAATGATCTGACGGGAACCATACCAAAGGAGATAGGGAATATCAAATCGTTGAGACTCTTACTCCTGAATGGCAATAAGTTATCTGGTTCTTTGCCTGATGAACTTGGCAATCTCTCAAACTTGCGTAGGCTCCAACTTGACCAAAACCAACTGTCAGGTCCAATACCACAATCGTTTACCAACTTTATCAACGTTAAACACATCCACTTGAACAATAACTCATTTACTGGTCAAATTCCTCATGAACTTTCAAAGCTACCCAATCTACTGCATTTGCTTGTCGACAATAACAACTTTTCTGGCCATCTTCCACCAGAATTTTCCATGCTACTAGAGCTGCGCATACTCCAAGCCGATAACAATAATTTCAGTGGAACAGAAATTCCTTCTACATATGCAAACCTTTCCAACCTAGTAAAACTAAGTCTTAGAAACTGCAGCTTACAAGGAGCTGTTCCTGATCTGAGTTCGATAGCCAATCTTACCTATTTGGATCTTAGCTGGAATCATCTTACTGGACCCATACCATCAAAGAAACTTTCAGATAATATGACAACTATTGACCTATCAAATAACAGGATCAACGGATCTATTCCTGGAGGCATCAAATTACTTCCTTTACTTCAAAGATTGTCACTAGAGAACAATTCTTTGTCTGGATCCATCCCTGCCAGTATATGGCTGAACTTCACTAGGAGTGCTAAGCTGACAATTGATCTCCGCAATAATTCATTTTCAGACATTTCAGGCAGTTCAAGAGTACCAGCAAATGTCACCTTGAGGCTTGCTGGCAATCCTATCTGCAAGGATTCCAAGATTCAAAATATTGGTCATTATTGTGCCTCTGAAGGGGTTGAATCTGAAAAATCTATGAATTCAACAACTGCCTGTCCTGCTCAAGCTTGTCCAGCAAATGATTTCTATGAATATGTCCCTGATTCCCCTGTTCCCTGCTATTGTGCAGCACCTCTGAGAATTGGATATCGTCTGAAAAGCCCAAGTTTCTCTTACTTTTCTCCTTATAGAACTGCTTTTGAATTATATCTGACTTGGACTTTACATTTGGATGGATACCAAGTGTGGATAGACTCAATTGCTTGGGAAGTAGGACCTCGTCTTAGGATGTATTTGAAACTTTATCCTAATTACAATGATTCCCACTCTTATAAGTTCAATACAAGCGAGATACGGCGTATTCAAGAAAAATTTGGATCATGGGATTTTCCTCCCACTGATTTTTTTGGACCATATGAACTCCTGAACTTCACTCTCCTTGGACCTTATGAAGGGTTAATTGTTGAGACACGTAAGGGGAAGATCAGTACAACCCTGCTAGTAATTGCCATTATTGCAGCTATTGCTTGTGCTGTCATGATCTCTGCAGTTGTCACTCTCGTGATAGTCAAAAGATATATCAAATACCATCCCAAGCTATCCAGGAAACATATGTCCTCTAATATTTCCATCAAAATTGATGGTGTGAAAGCATTCACTTTCAAAGAACTGGCTCATGCAACTGACAATTTCAGCAGTTCAACTGTAGTAGGCCAAGGAGGTTATGGGAAGGTTTATAAAGGCACTCTGTTTGATGAAACAGTTGTGGCTGTAAAGCGAATAGATGAAGGTTCTTTACAAGGCCAAAAAGAATTTTTGACTGAGATTGAACTTCTATCAAGGTTACATCATCGAAATCTAGTCTCATTGGTCGGATACTGTCATGAAGAAGGAGAGCAAATTCTGGTTTATGAGTTCATGCCTAATGGTAGCTTGCGGGATTGGATTTCTGGTAAAAGGAAGGGAAACCTAAACTTTGGCATGAGGATGAGGATTGCAATGGGTGCCGCCAAGGGCATACTGTATCTCCATACCGAGGCTAACCCTCCCATAATCCACCGAGATATTAAATCTAGCAACATACTTCTGGACTGCATGCTGGTTGCTAAAGTATCTGACTTTGGACTCTCACGACTTGCACCGAATGTGGATGACAAATATGTGTCAACAGTTGTGAGGGGAACACCAGGATACTTAGATCCGGAGTATTTTTTGACTCATATTTTAACGGACAAAAGTGATGTTTATAGCTTGGGAATTGTGTTTCTGGAGCTTTTGACAGGCAGGCACCCAATATCACGTGGGAAAAACATTGTTCGTCAGGTTAATGAAGCGCATCAGTGTGGCGTGATATCTTCCATTATAGATAGCAATATGGGTTTATATCCATCAGATTGTGTGGACAAGTTTCTAAATATTTCCCTCAGTTGTTGCCATGAGAATCCAGAGGAGAGACCAGGCATGATAGATGTGGTGAGGGAGCTGGAGATTATTCTCTCGATGTTGCCTGATTCTGAAACTTCTGTCCCAGACATTGCAAATGATTTTTCTGTCCAAATGGCTTCATCATCATCAACATCATCGAAATCCTACATGGCAAGGGACGACCGAAGCATGTCCTCTCCTATATTGTCAGGAAGCAACCTTGTCAGTGATGTTATCCCCACCATTGGTCCTCGTTAA 2970 0.4125 MSKFLPTPLPALTIGLQTVSVSSPHLVIFTHCIRLNSRDIGMLGPRLHGFGLVFSFFCFILTAAAQKTFPSEVQALVQIKKSLIDPKNHLRNWNKGDPCASNWTGVWCFNGVETDGYFHVCELYLMTSNLSGSLAPQLGQLSQLKIMNFMWNDLTGTIPKEIGNIKSLRLLLLNGNKLSGSLPDELGNLSNLRRLQLDQNQLSGPIPQSFTNFINVKHIHLNNNSFTGQIPHELSKLPNLLHLLVDNNNFSGHLPPEFSMLLELRILQADNNNFSGTEIPSTYANLSNLVKLSLRNCSLQGAVPDLSSIANLTYLDLSWNHLTGPIPSKKLSDNMTTIDLSNNRINGSIPGGIKLLPLLQRLSLENNSLSGSIPASIWLNFTRSAKLTIDLRNNSFSDISGSSRVPANVTLRLAGNPICKDSKIQNIGHYCASEGVESEKSMNSTTACPAQACPANDFYEYVPDSPVPCYCAAPLRIGYRLKSPSFSYFSPYRTAFELYLTWTLHLDGYQVWIDSIAWEVGPRLRMYLKLYPNYNDSHSYKFNTSEIRRIQEKFGSWDFPPTDFFGPYELLNFTLLGPYEGLIVETRKGKISTTLLVIAIIAAIACAVMISAVVTLVIVKRYIKYHPKLSRKHMSSNISIKIDGVKAFTFKELAHATDNFSSSTVVGQGGYGKVYKGTLFDETVVAVKRIDEGSLQGQKEFLTEIELLSRLHHRNLVSLVGYCHEEGEQILVYEFMPNGSLRDWISGKRKGNLNFGMRMRIAMGAAKGILYLHTEANPPIIHRDIKSSNILLDCMLVAKVSDFGLSRLAPNVDDKYVSTVVRGTPGYLDPEYFLTHILTDKSDVYSLGIVFLELLTGRHPISRGKNIVRQVNEAHQCGVISSIIDSNMGLYPSDCVDKFLNISLSCCHENPEERPGMIDVVRELEIILSMLPDSETSVPDIANDFSVQMASSSSTSSKSYMARDDRSMSSPILSGSNLVSDVIPTIGPR 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0438 989 FunFam Leucine-rich repeat protein kinase family protein 624 735 - -
Acco09g0438 989 ProSiteProfiles Protein kinase domain profile. 660 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0438 989 Gene3D Ribonuclease Inhibitor 68 328 IPR032675 -
Acco09g0438 989 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 70 231 - -
Acco09g0438 989 SUPERFAMILY L domain-like 86 426 - -
Acco09g0438 989 Pfam Leucine Rich Repeat 311 327 IPR001611 GO:0005515
Acco09g0438 989 ProSitePatterns Serine/Threonine protein kinases active-site signature. 780 792 IPR008271 GO:0004672|GO:0006468
Acco09g0438 989 Gene3D Phosphorylase Kinase; domain 1 630 735 - -
Acco09g0438 989 ProSitePatterns Protein kinases ATP-binding region signature. 666 688 IPR017441 GO:0005524
Acco09g0438 989 Pfam Protein tyrosine and serine/threonine kinase 664 924 IPR001245 GO:0004672|GO:0006468
Acco09g0438 989 SMART serkin_6 660 927 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0438 989 CDD STKc_IRAK 666 927 - -
Acco09g0438 989 PANTHER RECEPTOR-LIKE PROTEIN 55 79 930 - -
Acco09g0438 989 SUPERFAMILY Protein kinase-like (PK-like) 645 955 IPR011009 -
Acco09g0438 989 Pfam Leucine rich repeat N-terminal domain 71 108 IPR013210 -
Acco09g0438 989 Gene3D Transferase(Phosphotransferase) domain 1 736 943 - -
Acco09g0438 989 Pfam Leucine rich repeat 190 250 IPR001611 GO:0005515
Acco09g0438 989 Gene3D Ribonuclease Inhibitor 329 454 IPR032675 -
Acco09g0438 989 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 736 940 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0438 Acco-ChrAcco09 5928427 5942035 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0438 46 938 Receptor kinase-like Gene Family AT5G01950 60.730 0.0 1076
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Acco09g0438 PK_Tyr_Ser-Thr 1.3e-49 CL0016