Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0428 ATGGCGTCTTTGCTTCGTCTTCCTTCCGCACATAACCTTCAACACAATAATCTCACCACGACATTATCCTCCTCTTCTCTGAAATCCACTTCTCCAAATAACATTTCTTTCTTAACACCCCGTTTCAAGTGTAACCTTGTAAAGTGCAAAGCATTTCTGAACAACGTTCCCAGCGATTTGTTGGAGAGCACTATATACCTGAATCAATTCCCTGTTCTTCGATCAGTATTAGTGCAATTTCAGAGATTAACTGAAGATTTGTCCGATTTCCAGAAATGGGGTTTCCTTATTTTAGCAGGATTGACTTGGATTTACTTGACTGCGAGGCCTGGTGTTCTTATTGGCGCCATTGATGCTTACCTTCTGGCTCCTCTGCAACTCGGTTTGGATAATTTATCAGGAAGAAGGAATCTCAAGAGGACTGATTTTATGATTGGAGATAAGATTGGGGAAGGTTCATTTGGTGTTGTTTATTCTGGTGTTGTGGTTCCGAAGAATGGTTATGTTGAAGAGAATGTACAACAGAAGAGGGGAAGAGGCAAGACAGCAACAAACATGAATGTGAAATCTAAGGATAGAGTTATTCTCAAAAAGGTGAAGGTTGGAATTGTAGGAGCTGAACAATTCGGTGACTTTGAGGAATGGTTCAATTACAGGCTTTCCAGAGCAGCTCCTGAAACATGTGCTGATTTCCTGGGCAGTTTTGTTGCTGATAGAACAAATTCACAATTCATAAAGGGTGGAAAATGGCTTGTTTGGAAGTTTGAGGGAGACCTCACTCTTGCTGATTACATGAAAGATCGTAACTTTCCTTCAAACTTAGAGTCTGTCATGTTTGGAAGTGTCTTGCAAGGTGTAGACTCGTCTAAACGAAATGCTTTGATCATCAAGCAGATAATGCGCCAGATCATTACGTGTCTAAAGAAAATTCATGACACAGGCATTGTTCACAGAGATGTAAAGCCTGCCAACTTAGTAGTCACTAGACTGGGGAAGATTAAACTCATAGATTTTGGTGCAGCTGCAGACCTTCGAATTGGAAAAAATTATATTCCTGATAGCACCTTACTGGATCCTGACTACTGTCCCCCAGAATTATACGTTCTCCCAGAAGAAACACCAAATCCTCCTCCAGAACCAATTGCAGCTTTCCTTTCACCAATCTTGTGGCAGCTTAACAGTCCTGATCTGTTTGACATGTACTCTGCTGGGGTTGTACTGCTGCAAATGGCAATACCGTCCTTAAGGGTGGGACTTAGCAACCAAGCTTATTTGTGA 1278 0.4155 MASLLRLPSAHNLQHNNLTTTLSSSSLKSTSPNNISFLTPRFKCNLVKCKAFLNNVPSDLLESTIYLNQFPVLRSVLVQFQRLTEDLSDFQKWGFLILAGLTWIYLTARPGVLIGAIDAYLLAPLQLGLDNLSGRRNLKRTDFMIGDKIGEGSFGVVYSGVVVPKNGYVEENVQQKRGRGKTATNMNVKSKDRVILKKVKVGIVGAEQFGDFEEWFNYRLSRAAPETCADFLGSFVADRTNSQFIKGGKWLVWKFEGDLTLADYMKDRNFPSNLESVMFGSVLQGVDSSKRNALIIKQIMRQIITCLKKIHDTGIVHRDVKPANLVVTRLGKIKLIDFGAAADLRIGKNYIPDSTLLDPDYCPPELYVLPEETPNPPPEPIAAFLSPILWQLNSPDLFDMYSAGVVLLQMAIPSLRVGLSNQAYL 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0428 425 Gene3D Transferase(Phosphotransferase) domain 1 286 423 - -
Acco09g0428 425 Pfam Protein kinase domain 295 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0428 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 315 327 IPR008271 GO:0004672|GO:0006468
Acco09g0428 425 SUPERFAMILY Protein kinase-like (PK-like) 140 412 IPR011009 -
Acco09g0428 425 ProSiteProfiles Protein kinase domain profile. 143 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0428 425 SMART serkin_6 143 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0428 425 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 57 418 - -
Acco09g0428 425 Gene3D Phosphorylase Kinase; domain 1 131 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0428 Acco-ChrAcco09 5787743 5790714 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0428 143 344 MAP Kinase Kinase Kinase AT3G13530 23.415 2.50e-09 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Acco09g0428 Pkinase 3.2e-17 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g0428 09 5787743 5790714 Acco09g0428 09 5787743 5790714 ECH