Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0427 ATGGTTTCCTCTCAGTTTTCTGATTTGCCTAAGAATGGAGAGTGCAAACCATTCCAGAAACAAGTACCCTTTCCTTCAAGCCTCACTGACAGAGTAATTACGGACCAAGTTGAGCTTGATTTCTCTGATCTCTTTGGTACAGTTGCAGTGCCTTCTATAGAAGTGAATGATGATGATTCTGCTATCGTTGAGCATGAGGAAGAATCAAGTGAACTCGTTTATGATGATCCAGCTGTCATTATTACCCGCTCACACTCATTGGTTGGCCCTTCTACTTGTATTAGCCAATCACTCAAGCTTGGCAAACTCACTTTACATGAGACAGAGGATTCATTGGAAGCGACAGACAATGTTGCTGGAGAGACCATTAAAGAGGTTGATGAATCTAATGGCAACAATGTCATCGTTGAGGAGTATCTAGAAGGTGATAACGGGCATCTCACAAAGATCCAGGGCGTGAGCATTGAAGATTTCGAAATTTTGAAGGTTGTGGGACAGGGAGCATTTGCAAAAGTATATCAAGTGAGGAAAAAGGGTACTTCTGAAATATATGCAATGAAGGTAATGAGAAAGGACAAAATTATGGAAAAGAACCATGCTGCATACATGAAAGCTGAGAGGGATATTTTAACCAAAATAGAGCACCCCTTTATTGTTCAACTCAGATACTCTTTTCAGACAAAATACAGATTGTATCTTGTGCTGGATTTTGTAAATGGGGGTCATCTTTTTTTTCAGCTTTATCATCAAGGCCTTTTCAGAGAGGATCTAGCACGCATATATGCTGCTGAGATTGTTTCTGCAGTTTCCCATCTCCATGCAAATGGAATAATGCACAGGGATCTGAAACCTGAAAATATCCTGCTGGATGCTGATGGCCATGTTATGCTGACGGATTTTGGCCTGGCCAAGCAATTTGGAAGTGATACAAGATCTAACTCCATGTGTGGAACAATAGAGTACATGGCACCTGAAATTATTCTTGGCAAGGGCCATGATAAGGCTGCTGATTGGTGGAGTGTTGGAATCCTGCTGTTTGAGATGCTTACTGGAAAGCCTCCCTTCTGTGGTGGAAACCGTGAAAAGATTCAGCAGAAAATAATTAAAGACAAGATCAAGCTGCCAGCATTTTTGTCTAGTGAAGCACATTCACTGTTGAAAATGCTACTGCAGAAGGATTCGACTAAGCGATTGGGCAGTGGAACAAGGGGTAGCTTGGAAATCAGAGATCACAAGTGGTTTAAACCAATCAATTGGAGGAAGTTGGAAGTGCGCGAGGTCCAACCAAGCTTTCGCCCTGAGGTCGCCGGAAAACATTGTGTTGCCAACTTTGAGAAGCGCTGGACTGATATGCCCATCACAGTTTCACCGGCTAATAGTCCAAATGGTGGCAATCCTTTCAAAGACTTCAGTTATGTGAGACCTGCTGCTTCTTTCCTTCAAAGGAATAGCCCTGCTTGA 1461 0.4257 MVSSQFSDLPKNGECKPFQKQVPFPSSLTDRVITDQVELDFSDLFGTVAVPSIEVNDDDSAIVEHEEESSELVYDDPAVIITRSHSLVGPSTCISQSLKLGKLTLHETEDSLEATDNVAGETIKEVDESNGNNVIVEEYLEGDNGHLTKIQGVSIEDFEILKVVGQGAFAKVYQVRKKGTSEIYAMKVMRKDKIMEKNHAAYMKAERDILTKIEHPFIVQLRYSFQTKYRLYLVLDFVNGGHLFFQLYHQGLFREDLARIYAAEIVSAVSHLHANGIMHRDLKPENILLDADGHVMLTDFGLAKQFGSDTRSNSMCGTIEYMAPEIILGKGHDKAADWWSVGILLFEMLTGKPPFCGGNREKIQQKIIKDKIKLPAFLSSEAHSLLKMLLQKDSTKRLGSGTRGSLEIRDHKWFKPINWRKLEVREVQPSFRPEVAGKHCVANFEKRWTDMPITVSPANSPNGGNPFKDFSYVRPAASFLQRNSPA 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0427 486 ProSiteProfiles Protein kinase domain profile. 158 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0427 486 Gene3D Phosphorylase Kinase; domain 1 155 458 - -
Acco09g0427 486 SMART serkin_6 158 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0427 486 SMART pkinase_C_6 415 474 IPR000961 GO:0004674|GO:0005524|GO:0006468
Acco09g0427 486 FunFam Non-specific serine/threonine protein kinase 238 433 - -
Acco09g0427 486 SUPERFAMILY Protein kinase-like (PK-like) 155 473 IPR011009 -
Acco09g0427 486 FunFam Non-specific serine/threonine protein kinase 155 261 - -
Acco09g0427 486 ProSitePatterns Protein kinases ATP-binding region signature. 164 187 IPR017441 GO:0005524
Acco09g0427 486 ProSitePatterns Serine/Threonine protein kinases active-site signature. 277 289 IPR008271 GO:0004672|GO:0006468
Acco09g0427 486 Pfam Protein kinase domain 158 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0427 486 CDD STKc_AGC 164 414 IPR045270 GO:0004674|GO:0005524
Acco09g0427 486 Gene3D Transferase(Phosphotransferase) domain 1 238 433 - -
Acco09g0427 486 PANTHER RIBOSOMAL PROTEIN S6 KINASE 116 477 - -
Acco09g0427 486 ProSiteProfiles AGC-kinase C-terminal domain profile. 415 482 IPR000961 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0427 Acco-ChrAcco09 5783923 5786724 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0427 1 484 AGC Kinase Gene Family AT3G08720 67.623 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Acco09g0427 Pkinase 1.1e-74 CL0016