Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0424 ATGAATGGAGAAGATCCGATTCCCTGGGTCGTCCGTCGCCTTGCTGGCTCCGCCTCCCCTGCCCTCTCATTTGCGTTTCGGGATTTTCATTTTCAATCTCGTTTCCGTCATCTCTCTAAGTGCACAGCTTTGCGTGCGTTTGAAGCCCTGCTGATCCCCTTTGGTTCAGAAGGGCCTTCTTTGGATCCGGGCATTAAAGATGAAGAACTTTTTATGAGTGCTGATAAGTCACTGCTTTCAGAATCAGATTACTCTCTGGGGATTCATCGTCGTTCTCGGAAATCAGGATTTTTCAGCCGCTATGTCTCCTTCCCGTCTACCATTTTTGATGAAACTCAAAGTGGTAGGTTTGATGTGAAGGACGAAGAAGTTGTATCTGCTGGAGGCTCTAGTTTTCGTAGTGCACTTGAACATTGCACTTCTGTGACAGAAAAGGACTCTCAATCAGCTGAATCCGAGTTTTGCCAGCAGCTACCTTTGGAATGCTTCACTCGGGAGAGGAGGTGCCTGACATTGTGGGGTGCAATGGAACAGCATGATATGAATAGGCATACTGTGCCATTTGAAATATCAGGTGCTCCATCTCGAGTGCAGGAAAAGAATAAATCACAGAGAATTCGCCACAAAAGTGTGCAATTTGAAGATGACCTCTTACATGATGACAATTCAAGGTCAATATACATCAACGATCCCAAGAAGACAAATGACAAATATGAGTTCACGGGGAATGAGATCCGAACTAGTAAATACTCGGTTATCACCTTCCTCCCTAAGAATCTTTTCATTCAGTTTCATCGGGTTGCTTACTTGTATTTCCTTGCTATTGCGGCTCTAAATCAGCTCCCTCCACTGGCTGTATTTGGTAGGACTGTGTCTCTTTTCCCCCTCTTGTTTGTTCTTTGTGTGACGGCTATTAAGGATGGTTATGAGGATTGGCGAAGGCACAGGTCAGACCGCAATGAGAATAACCGAGAGTCTCTGGTACTTCAATTTGGTGATTTCCGGCCAAAAAAATGGAAGAGTATTGAAGTTGGTGAGGTTGTTAAAATCTTTGCTGATGAGACTATACCCGTGGATATGGTCTTATTGGGGACAAGTGATCAGAGTGGGCTTGCATATATTCAGACAATGAACTTGGATGGTGAATCAAATTTAAAGACAAGGTATGCTCGCCAGGAAATGGCTTCAGCAGTATCATCAGATTGTTGTGCGGTTTTGGGAATCATTAGATGTGAGCAACCAAACAGGAATATTTACGAATTCACAGCCAACATGGAGTTCAATGGGCATAGGTTTCCCCTTAGCCAATCAAATATTGTTCTGCGGGGTTGCCAACTGAAGAACACAGATTGGATAATTGGTGTTGTGGTTTATGCAGGGCAGGAAACAAAGGCAATGTTGAACAGTGCAGCTTCCCCTTCAAAAAGAAGCAGGCTAGAGGGTTATATGAACAGAGAAACCCTTTGGCTGTCAATTTTTCTCTTTACCATGTGTTTGGTTGTGGCCATTGGGATGGGCCTTTGGCTGATGCGTCATACGCACCAGCTTGACACCTTGCCGTACTACAGAAAAAGATACTTCACAAATGGTCCTGATAATGGAAAAAGATACAGATATTATGGGATACCTATGGAAATCTTTTTCTCATTTTTGAGCTCTATTATAGTTTTCCAGATAATGATACCCATATCTCTTTACATAACTATGGAGTTGGTTCGATTGGGCCAGTCATATTTCATGATTGAGGACACGGATATGTATGATGCCAACTCTGGATCAAGGTTTCAGTGTAGGTCATTAAACATCAATGAAGATTTGGGTCAAATACGTTATGTTTTTTCAGACAAGACAGGAACACTTACAGAAAATAAGATGGAATTTCGAAGGGCTAGTATACATGGACGGAATTATTGCGGTTCATTGCTTATGGGCGATAATAAAATAGCAGCAACAGTTAGCGGCAGAGGTAGATGGAAGCTCAAATCTGAAATTGCTGTTGATTCAGAGCTCCTAACACTGTTGCATACAGACTCAGATAGAGATGAAAGGATTGCTGCACATGAATTTTTCCTTACATTGGCTGCTTGTAATACTGTGATCCCTATTGTTAGTTGTGGAACAAGCGGGTCAAATGAGGGTGTAGGATGTATTGAATACCAGGGAGAATCTCCTGATGAACAAGCTTTAGTTGCTGCAGCCTCTGCTTATGGATATACACTTTTTGAGCGGACATCAGGACATATTGTTATTGATGTCAATGGTGAGAAACTCAGGTTGGATGTGTTGGGTCTGCACGAGTTTGATAGTGTTCGGAAAAGAATGTCTGTTGTTATTCGATTTCCTGACAATACGGTAAAGGTGTTAGGTAAAGGAGCTGATACCTCAATGTTTAGCATCTTAGCTGATGAAATTGACAGCGGTGATAGTATACAGCTTGCAACTCAGGGTCAGTTGAATGAATATTCTTTGCAAGGTTTACGCACACTTGTAGTTGCTTCCAGGAATCTTTCAGATGCAGAACTTGAGCAGTGGCAGAGCATGTATGAAGAGGCAAGCACTTCATTAACTGATAGAGGTGCAAAACTACGCCAAACAGCAGCTCTAATAGAATGCAACTTAAAGCTACTTGGAGCAACTGGGATTGAGGACAAACTGCAAGAGGGTGTGCCAGAAGTTATTGAGTCCCTGCGGCAAGCTGGAATTAAGGTCTGGGTTCTTACTGGTGATAAGCAGGAGACAGCAATTTCAATTGGTCTCTCCTGCAAACTTTTGACTCCAGATATGGAGATGATAATTATAAATGGTACATCAGAAAATGAATGCAGAAATCTTTTGGCTGATGCTAAAGCCAAATTTGGTATAAGATCTGCATGTAAAAGAAGCCAGAATATGAGGCACAAAACAAATGACGGTCATGGTGATCTTGAGACTGCCAATAATGCGAAGTCATTCAATATGCCTAAATGTGATCTAAGGGAAGAAGGAACTAATGCTTCACTGGCACTTGTAATTGATGGAAACAGTTTGGTTTACATCTTGGAGAAGGAACTGGAGTCAGAGCTTTTCGACCTTGCAACTTCTTGTAGAGTTGTGCTATGCTGTCGTGTTGCACCCCTGCAAAAAGCAGGAATTGTTGATTTGATAAAGAGCCGCACTGTTGATATGACACTGGCTATTGGTGATGGAGCCAATGATGTGTCAATGATCCAAATGGCAGATGTCGGTGTTGGAATATGTGGGCAGGAAGGGCGCCAAGCAGTGATGGCATCTGATTTTGCTATGGGACAGTTTCGATTTTTGAAAAGATTGCTTCTGGTGCATGGGCACTGGAATTATCAGCGTGTTGGCTATTTAGTTCTCTACAATTTCTACCGCAATGCCGTCTTTGTCTTGATGTTATTCTGGTATATATTATGCACTGCTTTTTCAACAACTTCTGCATTGACGGATTGGAGCAGTGTATTATATTCTGTGATATACACTTCAGTCCCTACTATTGTTGTAGGTGTTCTGGACAAAGACTTGAGTCATAAAACACTCTTGCAGCATCCAAAACTTTATGGTGCAGGTCACCGGCATGAGGCTTACAATATGCATTTATTTTGGATCACAATGATTGACACGCTATGGCAGAGTCTTGTTCTCTTCTACATACCCTTGTTCACCTATAAGGATAGTACAATTGATATATGGAGCATGGGCAGTTTGTGGACAATTGCAGTTGTTGTCCTTGTAAATGTGCATTTGGCTATGGACATTAGGCATTGGGTATTGATTACACATGTTGCTGTATGGGGGTCCATAATCATCACATTTGGTTGCATGGTGGTATTGGATTCTTTTCCTGTCCTTCCCAACTACTGGACTTTTTATCATGTGGCTAAGTCCCCTACATATTGGATCACAATTTTGCTTATAATTATTGTGGCAATGCTCCCTCGCTTTGTCTGTCATCTGATGAGTTGCGGTGGCGGAGTGCATTGA 3984 0.4224 MNGEDPIPWVVRRLAGSASPALSFAFRDFHFQSRFRHLSKCTALRAFEALLIPFGSEGPSLDPGIKDEELFMSADKSLLSESDYSLGIHRRSRKSGFFSRYVSFPSTIFDETQSGRFDVKDEEVVSAGGSSFRSALEHCTSVTEKDSQSAESEFCQQLPLECFTRERRCLTLWGAMEQHDMNRHTVPFEISGAPSRVQEKNKSQRIRHKSVQFEDDLLHDDNSRSIYINDPKKTNDKYEFTGNEIRTSKYSVITFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNRESLVLQFGDFRPKKWKSIEVGEVVKIFADETIPVDMVLLGTSDQSGLAYIQTMNLDGESNLKTRYARQEMASAVSSDCCAVLGIIRCEQPNRNIYEFTANMEFNGHRFPLSQSNIVLRGCQLKNTDWIIGVVVYAGQETKAMLNSAASPSKRSRLEGYMNRETLWLSIFLFTMCLVVAIGMGLWLMRHTHQLDTLPYYRKRYFTNGPDNGKRYRYYGIPMEIFFSFLSSIIVFQIMIPISLYITMELVRLGQSYFMIEDTDMYDANSGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFRRASIHGRNYCGSLLMGDNKIAATVSGRGRWKLKSEIAVDSELLTLLHTDSDRDERIAAHEFFLTLAACNTVIPIVSCGTSGSNEGVGCIEYQGESPDEQALVAAASAYGYTLFERTSGHIVIDVNGEKLRLDVLGLHEFDSVRKRMSVVIRFPDNTVKVLGKGADTSMFSILADEIDSGDSIQLATQGQLNEYSLQGLRTLVVASRNLSDAELEQWQSMYEEASTSLTDRGAKLRQTAALIECNLKLLGATGIEDKLQEGVPEVIESLRQAGIKVWVLTGDKQETAISIGLSCKLLTPDMEMIIINGTSENECRNLLADAKAKFGIRSACKRSQNMRHKTNDGHGDLETANNAKSFNMPKCDLREEGTNASLALVIDGNSLVYILEKELESELFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTVDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVLYSVIYTSVPTIVVGVLDKDLSHKTLLQHPKLYGAGHRHEAYNMHLFWITMIDTLWQSLVLFYIPLFTYKDSTIDIWSMGSLWTIAVVVLVNVHLAMDIRHWVLITHVAVWGSIIITFGCMVVLDSFPVLPNYWTFYHVAKSPTYWITILLIIIVAMLPRFVCHLMSCGGGVH 1327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0424 1327 Pfam E1-E2 ATPase 333 571 - -
Acco09g0424 1327 SUPERFAMILY HAD-like 608 1105 IPR036412 -
Acco09g0424 1327 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 619 889 IPR023299 GO:0000166
Acco09g0424 1327 Gene3D - 299 469 - -
Acco09g0424 1327 ProSitePatterns E1-E2 ATPases phosphorylation site. 615 621 IPR018303 -
Acco09g0424 1327 Pfam Phospholipid-translocating ATPase N-terminal 226 291 IPR032631 -
Acco09g0424 1327 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 206 1319 - -
Acco09g0424 1327 SFLD p-type atpase 597 1110 IPR044492 -
Acco09g0424 1327 FunFam Phospholipid-transporting ATPase 872 1099 - -
Acco09g0424 1327 NCBIfam phospholipid-translocating P-type ATPase 240 1319 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Acco09g0424 1327 NCBIfam HAD-IC family P-type ATPase 1029 1145 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco09g0424 1327 NCBIfam HAD-IC family P-type ATPase 872 924 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco09g0424 1327 SUPERFAMILY Calcium ATPase, transmembrane domain M 240 1316 IPR023298 -
Acco09g0424 1327 CDD P-type_ATPase_APLT_Dnf-like 242 1219 - -
Acco09g0424 1327 Gene3D - 873 1099 IPR023214 -
Acco09g0424 1327 Pfam Cation transport ATPase (P-type) 722 797 - -
Acco09g0424 1327 Pfam Phospholipid-translocating P-type ATPase C-terminal 1087 1319 IPR032630 -
Acco09g0424 1327 SFLD Haloacid Dehalogenase 597 1110 - -
Acco09g0424 1327 Gene3D - 716 853 IPR023299 GO:0000166
Acco09g0424 1327 SUPERFAMILY Calcium ATPase, transduction domain A 324 465 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0424 Acco-ChrAcco09 5738967 5748359 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0424 203 1320 Primary Pumps ATPases AT5G04930 57.904 0.0 1310
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g0424 09 5738967 5748359 Acco09g0424 09 5738967 5748359 ECH