Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0421 ATGGAGAATCTGATGGCTGTGAAGGAGCTAGAGAGAGGGAGAGAGTTAGCGAACCTGCTTCGGCAATTGATGTTTAGGGGTGTGGATCAGGAAGATGATGATAAGGTTAAGGGCTTAACAACTGAGTATCTGGTGGCTAAAGTGTTGGATTCTTTCACTAACACACTCTCTCTCTTCAATCACCATTCCACTGATTCCTCCATTACTACTTCTTCCTTCTCTCAGTTGCCTGCTCACTCTGATGAATCTTCTCATGGGAACCCTAAGACCAAAAGCCCCACTACCCTTACAGATCGAACAAGATTCTCTCCCAAGAAAAGGAAAAGTGCACAGATACAAACATGGGTTGAGGAATCCAAGATGAGTCCCAAGGAAGATGGGCATGCATGGAGAAAATATGGCCAAAAAATCATCCTCAAAGCTAAACATCCAAGGAACTATTACAGATGCACTCACAAGCATGAACAAGGATGTGAAGCAATAAAACTTGTTCAGAAAATCCAAGACGATCCTCCTCTTTTCAGGAGCACTTATTTTGGCCACCACACTTGCACCAATCGTCTCAATCCGCATATCTTTCTTGATTCTTATGATCACATTAATTCAACTTCAGCTTTTATTCTCAGCTTCGAAAACAATAGTCACAACAACGACAATAATAATCTTATTACCTCCTTTGACCCAGAACACAACAACAACACTAGCTCCTTCTCTGTCTCGTCTGGCTTTTTATTTCCATCTTCTAGTAATTCTGTGAAAAAGGAGGAGCACTGTGACAACAACATCAAGCAAGAGAAGAACAATAATTACAATAATGATGAGATTATTAATGTTGTTGCTTCATGTCCCTCCAATAATGATTGCTTTGTGTCTCATCCTCATGAAGAAGAAGCAGTTCTTCCTGCTTTTGGAGCTGGAGATTATGATCAAGTGGATGTGTTTAATTCTGCTGCAGTTTATGATCCTCTTGGCGGGTTTGAAGATCTCTTATTTGATATTATTTGA 1005 0.404 MENLMAVKELERGRELANLLRQLMFRGVDQEDDDKVKGLTTEYLVAKVLDSFTNTLSLFNHHSTDSSITTSSFSQLPAHSDESSHGNPKTKSPTTLTDRTRFSPKKRKSAQIQTWVEESKMSPKEDGHAWRKYGQKIILKAKHPRNYYRCTHKHEQGCEAIKLVQKIQDDPPLFRSTYFGHHTCTNRLNPHIFLDSYDHINSTSAFILSFENNSHNNDNNNLITSFDPEHNNNTSSFSVSSGFLFPSSSNSVKKEEHCDNNIKQEKNNNYNNDEIINVVASCPSNNDCFVSHPHEEEAVLPAFGAGDYDQVDVFNSAAVYDPLGGFEDLLFDII 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0421 334 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 14 214 IPR044810 GO:0003700
Acco09g0421 334 MobiDBLite consensus disorder prediction 69 127 - -
Acco09g0421 334 Gene3D WRKY domain 109 186 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco09g0421 334 MobiDBLite consensus disorder prediction 69 99 - -
Acco09g0421 334 SUPERFAMILY WRKY DNA-binding domain 120 185 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco09g0421 334 Pfam WRKY DNA -binding domain 125 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco09g0421 334 SMART WRKY_cls 124 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco09g0421 334 ProSiteProfiles WRKY domain profile. 119 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0421 Acco-ChrAcco09 5681780 5683435 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0421 2 215 WRKY Transcription Factor Family AT3G56400 34.783 4.17e-30 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco09g0421 WRKY 1.9e-23 CL0274