Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0417 ATGGAGAATCTGATGGCTGTGAAGGAGCTGGAGAGAGGGAGAGAGTTTGCGAACCAGTTTCAGAGATTGATGTTTACGGGTGAGGATCAGGAAGATGATGATAAGGTTAAGGGCTTAACGACGTCGTCTGCTGAGGATCTGGTGGCCAAAGTGTTGGATTCTTTTACTAACACACTCTCTCTCTTCATTCACCGCTCAGCAGATTCCTCCATTACTACTACTTCTTCCTTCTCTCACTCGCCTGCTCACTTTGATGAATTTCATGAGAATCCTAAGAACAAAAGCCCCACCACCATTAAAGATCGAACAAGATCCTCTCCCAAGAAAAGGAAAAGTGCCCAGATACAAACATGGGTAGAGGAATCCAAGATGAGCCCAAAGGAAGATGGGCATGCATGGAGAAAATATGGCCAAAAAATAATCCTCAATGCTAAACATCCCAGTGTTGTTGATTCATGTCCACCCAATAATGATTACTTTGTGTCTCATCCTCATGAAGAAGAAGCTGGTCTTCCTGCTTTTGGATCTGGAGATTATGATCTAGTGGATGTGTTTAATTCTGCTGCATTTTATGATTCTCTTGACGGGTTTGAAGATCTCTTATTTGATATTAATTGA 618 0.4223 MENLMAVKELERGREFANQFQRLMFTGEDQEDDDKVKGLTTSSAEDLVAKVLDSFTNTLSLFIHRSADSSITTTSSFSHSPAHFDEFHENPKNKSPTTIKDRTRSSPKKRKSAQIQTWVEESKMSPKEDGHAWRKYGQKIILNAKHPSVVDSCPPNNDYFVSHPHEEEAGLPAFGSGDYDLVDVFNSAAFYDSLDGFEDLLFDIN 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0417 205 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 10 147 IPR044810 GO:0003700
Acco09g0417 205 Gene3D WRKY domain 111 165 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco09g0417 205 Pfam WRKY DNA -binding domain 128 148 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco09g0417 205 SUPERFAMILY WRKY DNA-binding domain 123 153 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco09g0417 205 MobiDBLite consensus disorder prediction 82 103 - -
Acco09g0417 205 MobiDBLite consensus disorder prediction 72 114 - -
Acco09g0417 205 ProSiteProfiles WRKY domain profile. 122 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco09g0417 205 SMART WRKY_cls 127 167 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0417 Acco-ChrAcco09 5585284 5587147 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0417 4 153 WRKY Transcription Factor Family AT3G56400 29.936 3.19e-09 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco09g0417 WRKY 1.3e-05 CL0274