Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0415 ATGGAGAATCTGATGGCTGTGAAGGAGCTGGAGAGAGGGAGAGAGTTTGCGAACCAGCTTCGGAGATTGGTGTTTAGGGGTGCGGATCAAGAAGATGATGATAAGGTTAAGGGCTTAACGACGTCATCCGCTGAGGATCTGGCGGCTAAAGTGTTGGATTCTTTCACCAACACACTCTCTCTCTTCAATCACCATTCAGCATATTCCTCCATTACTACTTCTTCCTTCCCTCACTTGCCTGCTCACCCTGATGAATTTCATGAGAACCCTAAGACCAAAAGCCCCACCACCATTAAAGATCGAACAAGATCCTCTCCCAAGAAAAGGAACTATTACAGATGCACTCACAAGCATGACCAAGGATGTGAAGCAATAAAACATGTTCAGAAAATCCAAGACGATCCTCATATCTTTCTTGATTCTCATGACCTCGTTAATTCAACTTCAGCTTTTATTCTCAGCTTCCAAAACAATAATCACAACAACAACAATAATAATCTTATTACCACCATTGACCAAGAAAACAACAACAACAACACTAGCTCCTTCTTTGTCTCGTCTGGCTCTTTATTTCCACCTTCTAGTTATGAGGAAAAAAAGGAGCACTGTGACAACAACATCAAGCAGGGGAAGAACAATAATTACCATAATGATGAGATTATTAATGTTGTTGCTTCATGTTCATCCAATAACGATTGCTTTGTGTCTCATCCTCACGAAGAAGAAGCTGCTCTTCCTGCTTTTGAATATGGAGATTATGGTCAAGTGGATGTGTTTAATTCTACTGCATTTTGTGATCCTCTTGGCGGGTTTGAAGATCTCTTATTGGAGATTATTTGA 840 0.4083 MENLMAVKELERGREFANQLRRLVFRGADQEDDDKVKGLTTSSAEDLAAKVLDSFTNTLSLFNHHSAYSSITTSSFPHLPAHPDEFHENPKTKSPTTIKDRTRSSPKKRNYYRCTHKHDQGCEAIKHVQKIQDDPHIFLDSHDLVNSTSAFILSFQNNNHNNNNNNLITTIDQENNNNNTSSFFVSSGSLFPPSSYEEKKEHCDNNIKQGKNNNYHNDEIINVVASCSSNNDCFVSHPHEEEAALPAFEYGDYGQVDVFNSTAFCDPLGGFEDLLLEII 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0415 279 SUPERFAMILY WRKY DNA-binding domain 102 139 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco09g0415 279 MobiDBLite consensus disorder prediction 81 107 - -
Acco09g0415 279 MobiDBLite consensus disorder prediction 79 109 - -
Acco09g0415 279 ProSiteProfiles WRKY domain profile. 103 143 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco09g0415 279 SMART WRKY_cls 98 141 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco09g0415 279 Pfam WRKY DNA -binding domain 103 138 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco09g0415 279 Gene3D WRKY domain 99 139 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco09g0415 279 Coils Coil 157 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0415 Acco-ChrAcco09 5540703 5542724 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0415 6 142 WRKY Transcription Factor Family AT1G80590 34.932 1.36e-10 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco09g0415 WRKY 2.9e-08 CL0274