Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0402 ATGGTTGAACATGTTATGAACAAGCTTATTGACGCTAAAGCAAGAGCAGCAGAATCGACTTCTCCTTCTCTGATGAGAGAAGAGGAACTAGATGGCGTTTTGGCTGGAAAATATCAAATCCGCAGGTTAGCCGGTGTCGGAGGTTCTGCTAAGGTTTACGAAGCTTGCCGTCTTCTTACAAAGCAGCTTGTGGCCATTAAGGTCATGAACAAGCAAGACGTAACAGAGCAGAGCCTTTCAACGGAAATCGCTATCATGCGCCGGCTGAATCATCCCCACATCGTGAAACTCTACGAGGTCCTCACTACCGAAACCAAGATTTTCCTCGTCATGGAGTTCGCAAAAGGCGGCGAGCTCTTTGATATATTGCGTAATGAGGGCCCTTTTAGCCAAGATCAGTACCGTCGGTGGTTCCAACAGTTAATCTCAGCCGTCCAGCACTGCCACTCTCGCGGCGTGTTCCACCGTGATTTGAAGCTTGAGAACCTCCTTCTAGACGAGAAATTGAACATTAAGGTTTCGGACTTCGGGTTGAGCGCCACAACGGAGGATATCCGACCCGACGGCAAGCTTCATACCTTCTGTGGGACCCCTGCATACTTGGCCCCTGAGATGATCAACGGTGAAGGCTACGATGGAGATAAAGTCGATGTGTGGCAGTGCGGCGTCGTTTTGTACGTGCTTACCTTTCAGTCTTTGCCGTTCAACGGCCCCGATGACCGTACGATGATGAGGGAAATTGCCCGAGGCCTGGTTTGCATCCCCCATCGGGACAAACCCGAAAATTTGAGACATTTAATCAAACGGTTACTAGATCCGAATCCGAAAACGAGGATTACGATCGATGATATTCTGAAAGACCCTTGGTTCAGAAAAGGGTACATAGAGATAAAAGTCCAGCAGAAGAAGCCAACTAAAATTACGAGATATGTCACGTGCCATCTTATGTAA 951 0.4826 MVEHVMNKLIDAKARAAESTSPSLMREEELDGVLAGKYQIRRLAGVGGSAKVYEACRLLTKQLVAIKVMNKQDVTEQSLSTEIAIMRRLNHPHIVKLYEVLTTETKIFLVMEFAKGGELFDILRNEGPFSQDQYRRWFQQLISAVQHCHSRGVFHRDLKLENLLLDEKLNIKVSDFGLSATTEDIRPDGKLHTFCGTPAYLAPEMINGEGYDGDKVDVWQCGVVLYVLTFQSLPFNGPDDRTMMREIARGLVCIPHRDKPENLRHLIKRLLDPNPKTRITIDDILKDPWFRKGYIEIKVQQKKPTKITRYVTCHLM 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0402 316 FunFam Aurora kinase A 32 117 - -
Acco09g0402 316 FunFam Maternal embryonic leucine zipper kinase 28 313 - -
Acco09g0402 316 CDD STKc_AMPK-like 37 289 - -
Acco09g0402 316 SMART serkin_6 38 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0402 316 Gene3D Transferase(Phosphotransferase) domain 1 30 314 - -
Acco09g0402 316 SUPERFAMILY Protein kinase-like (PK-like) 34 308 IPR011009 -
Acco09g0402 316 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Acco09g0402 316 ProSiteProfiles Protein kinase domain profile. 38 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0402 316 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 30 298 - -
Acco09g0402 316 Pfam Protein kinase domain 38 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0402 Acco-ChrAcco09 5314678 5315628 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0402 33 298 CBL-interacting serine-threonine protein kinases AT2G30360 56.250 2.22e-103 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Acco09g0402 Pkinase 9.3e-71 CL0016