Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0398 ATGGTCAGTTTCTCGCTGAAGCTACCGACTATGACGAGCTTTAGCCAGAACTCTATCTCCAAGAAGACTAACTCACCTACAATCCCCGTTCCCTTCCTCTTATTCTTCTTCTTTCATCTCCTTTTCACTATTCCGGTGACCTCCTACCGTCCTGTTGATCATGTCGCAATCGACTGTGGTAACTCCGGCGATATTCCGGCTGATGATCCGCGGAACTGGACCAGAGATATTGGCTCCACTCTTTTCTCTCTCATAGATCCCGCCAACAAAAGCCAATCCATCAAAGCTGAGGCATCAAACGCACAGCGCATCCCTTACGGCACTGCCAGGCTCTCTCGTTCTGAATTTTCCTACTCATTTCCGGTGACCGACAGCCAAAACTTTGTTCGTCTCTTCTTTTACATATCTTCCTACGGCGACTTCCTTCACTCCGACTCTCTCTTCTCCGTCAAAGCAGGAAACCACACCCTTCTTAAGGACTTCAACGCTTCACTTTATGCCGGTGGTACACTATCACGAGAATACTGTATCAACGTTGACGCTGGTCAGAGGCTCAACATAACCTTCATGCCCAACCAATCTCATCCAAATGCCTATGCTTTCATCAACGGGATCGAGGTCGTCTCTATGCCCAACTTTCTTTACTACACCAAACCTGATGATCTTCAGTCCATGCGACTAAATGATGGAACCCAGCAGTATACGGTCAAGAACAACAATGCTCTCGAGGCTGTGTATAGAATTAATGTTGGCGGAAAGCAGATTTCTGCAGATAAAGATACCGGCATGTTTCGTTATTGGGACCAAGATAATGAGTACTTGGAGATTGGGGAGCGCCCACTAAGTATTTCATCAGGTTTTGGTTTAAACCTAACCTACAGAGATGATCAAAATTATTTTGCTCCTGATGAAGTATATAAGACTGCTCGGAACTACGGGATGAATGAAAGATCCAAATTTAATGTCACTTGGGAATTTGAAGTGGATTCGGTGTTTTATTATATGGTGAGATTGCATTTTTGCGAGTTTGATGAACACATTAATAAAACTGGAGACAGAGTTTTTCAAATCTTTATAAATGATGCTTTGGTGGAGTCTTTGGGCGATGTGATGTATTGGACTGACAATCAGAGACTAGTTCCTGTCCACAGGGACTATGCAGTGTCGACGCCGATCGGTGGAAGCTTCAAGAATCTTTCAATTAAGTTGCAACCACACCCAACTGCAAGAAGTTCTTACAGAGATGTGTTATTGAATGGTATTGAAATTTTGAAAATTAGCGATTACAATGACAATCTCGCGGGTCCTAATCCAGATCCACCTCCATCACCCCCACTGCCAACCACGCTATCCTCAGAGTCATCTAAGAACAGAAACAAAGCAAAGGTAATTTCCATTATCGTTGGGGCAATATCAGGCTTCATTGTGCTGTCTCTTATTGTTCTGTTGATTTACCGGCGATTCATTAGAGCGCCGGTCAAGGAAGGAGGCTCATGGTGGGGACAAAAATCAGCAGACTCATCCAAGAAAAACAAATCCCATGGGTCATCATTGCCGTCCGATTTGTGTCGCTACTTTTCTATAGATGAGATAAGAGCAGCCACTAGTAATTTTGATGATATTTTCATTGTGGGCGTTGGAGGGTTTGGTAATGTCTATAAAGGCTACATTGATAATGGTACGGTTCCTGTGGCAATCAAACGGCTCAAACAAGGTTCGCAACAAGGCCTCCATGAGTTCCTAACAGAGATTGAAATGCTCTCTCAACTTCGTCACAATCATTTAGTGTCTCTCATTGGTTACTGCAACGACGGCAACGAGATGATCCTCGTATACGAGTTCATGGCTCGTGGGACCCTCCGTGATCATCTTTATGATTCAGATAACCCTCCACTTTCCTGGGAAAAAAGGTTGGGGATGTGCCTTGGCGCGGCGCGTGGACTCCACTATCTTCATACAGGTGCAAAACATAATATCATCCACCGAGATGTGAAATCTACGAATATCTTAATAGATGAGAAATGGGTGGCTAAGGTTTCGGATTTTGGATTATCCAAAGTAGGACCCACAGGGCTGTCCAGGTCTCACATTAGCACAGTGGTAAAAGGAAGCCTCGGTTACTTGGATCCAGAATACTACAAGCGTCAACGGTTGACTGAAAAGTCTGACGTTTACTCTTTTGGAGTTGTGTTGCTGGAAGTATTGTGTGGGAGGCCTCCTTTGAAACGTAACGTGGAGAAGCAGAAATCAAGTCTAGTTGAGTGGGTCCGAAAATGCCATCGCGAGGGTGTGATTCATCAAACGGTGGATCCTTTGCTGATAGAAAGCATCACACCAGAGTGTTTGAAAGCATTTAGTGACATGGCACTGAAGTGTTTGGTGGAAGATGGGAATGAAAGGCCTCCTATGAACGACGTCGTATGGGGGCTAGAGTTTGCGTTGCAACTTCAAGAAGGAAAAGAGGAAGAAGAGGGGCTTGATGTGGCGGAAATAGAAGGAAAGAGCGAGGAAAGGGCTCTGATAAGGAAAGTGACAGGGATGGAAGAAAGCAGAGAAGGTTTCACGAGCAGTGATGAATCAAAAGCAAGCAGGTTGACCACTTCAAGCAGTGAAAATCAGTCTTTGTCTTCTGGGGCGATCTTCTCTGAGTTGGGTCATCCAACTGTTCGATGA 2673 0.4482 MVSFSLKLPTMTSFSQNSISKKTNSPTIPVPFLLFFFFHLLFTIPVTSYRPVDHVAIDCGNSGDIPADDPRNWTRDIGSTLFSLIDPANKSQSIKAEASNAQRIPYGTARLSRSEFSYSFPVTDSQNFVRLFFYISSYGDFLHSDSLFSVKAGNHTLLKDFNASLYAGGTLSREYCINVDAGQRLNITFMPNQSHPNAYAFINGIEVVSMPNFLYYTKPDDLQSMRLNDGTQQYTVKNNNALEAVYRINVGGKQISADKDTGMFRYWDQDNEYLEIGERPLSISSGFGLNLTYRDDQNYFAPDEVYKTARNYGMNERSKFNVTWEFEVDSVFYYMVRLHFCEFDEHINKTGDRVFQIFINDALVESLGDVMYWTDNQRLVPVHRDYAVSTPIGGSFKNLSIKLQPHPTARSSYRDVLLNGIEILKISDYNDNLAGPNPDPPPSPPLPTTLSSESSKNRNKAKVISIIVGAISGFIVLSLIVLLIYRRFIRAPVKEGGSWWGQKSADSSKKNKSHGSSLPSDLCRYFSIDEIRAATSNFDDIFIVGVGGFGNVYKGYIDNGTVPVAIKRLKQGSQQGLHEFLTEIEMLSQLRHNHLVSLIGYCNDGNEMILVYEFMARGTLRDHLYDSDNPPLSWEKRLGMCLGAARGLHYLHTGAKHNIIHRDVKSTNILIDEKWVAKVSDFGLSKVGPTGLSRSHISTVVKGSLGYLDPEYYKRQRLTEKSDVYSFGVVLLEVLCGRPPLKRNVEKQKSSLVEWVRKCHREGVIHQTVDPLLIESITPECLKAFSDMALKCLVEDGNERPPMNDVVWGLEFALQLQEGKEEEEGLDVAEIEGKSEERALIRKVTGMEESREGFTSSDESKASRLTTSSSENQSLSSGAIFSELGHPTVR 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0398 890 MobiDBLite consensus disorder prediction 859 881 - -
Acco09g0398 890 ProSiteProfiles Protein kinase domain profile. 538 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0398 890 FunFam FERONIA receptor-like kinase 240 427 - -
Acco09g0398 890 Gene3D - 54 211 - -
Acco09g0398 890 Gene3D - 240 427 - -
Acco09g0398 890 MobiDBLite consensus disorder prediction 842 890 - -
Acco09g0398 890 Pfam Protein tyrosine and serine/threonine kinase 544 807 IPR001245 GO:0004672|GO:0006468
Acco09g0398 890 PANTHER OS03G0124300 PROTEIN-RELATED 32 494 IPR046957 GO:0004672
Acco09g0398 890 MobiDBLite consensus disorder prediction 501 518 - -
Acco09g0398 890 ProSitePatterns Serine/Threonine protein kinases active-site signature. 659 671 IPR008271 GO:0004672|GO:0006468
Acco09g0398 890 Gene3D Phosphorylase Kinase; domain 1 499 614 - -
Acco09g0398 890 FunFam Receptor-like protein kinase FERONIA 510 614 - -
Acco09g0398 890 SMART serkin_6 538 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0398 890 Gene3D Transferase(Phosphotransferase) domain 1 615 836 - -
Acco09g0398 890 MobiDBLite consensus disorder prediction 432 454 - -
Acco09g0398 890 MobiDBLite consensus disorder prediction 842 858 - -
Acco09g0398 890 FunFam FERONIA receptor-like kinase 54 211 - -
Acco09g0398 890 Pfam Malectin-like domain 57 425 IPR024788 -
Acco09g0398 890 CDD STKc_IRAK 544 807 - -
Acco09g0398 890 ProSitePatterns Protein kinases ATP-binding region signature. 544 567 IPR017441 GO:0005524
Acco09g0398 890 SUPERFAMILY Protein kinase-like (PK-like) 512 812 IPR011009 -
Acco09g0398 890 FunFam Receptor-like protein kinase FERONIA 615 831 - -
Acco09g0398 890 MobiDBLite consensus disorder prediction 497 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0398 Acco-ChrAcco09 5239253 5241925 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0398 44 890 Receptor kinase-like Gene Family AT3G51550 45.608 0.0 729
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Acco09g0398 Malectin_like 1.4e-41 CL0202