LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco09g0363	ATGGGGAATTATAGGTTTAGGTTATCAGATATGATCCCTAATGCTTGGTTTTACAAGCTGAGGGACATGGGGAAGAGGAAGAACCAGACATTGGACAAGAAGAAGAAGAAGAAGAAGGAATCTTTATCCTCATCGACAACATCAAAGACATCAAAACCAAAGCAACCCAAACAGAGCACTCCCAGAAAATCTTACTACTTTACGAGGGAGCTTAATGATCCGACCGATAGAGATAGAATCTTCACTTCACCACCTTCCCCTAACCCCAAAGTTTCTGTTTCAGACACCAATTTCCCAGTAACGCCCAGAAAACCCTCGTCCAAACAGAGACCTAAGAGAAGAACAACAACAAGAACTTCTCCGAAGCTCGTGTCTTCCTCTGTTTCTTCCAGCTGTCACTGCCGAACCACTCTCGATTCCGTTTGGACCAAGTCGGATTCTCCCCCCGAAAACTCATCGTCTCCGTTTGATAGCTCTGTTGATTCAGAATTCCCAGAGCCAGAGTTCAGAACAGACCGTGTCCTTCCCACTGAGTTGTCATTTTTCGATGATAATGATTGCGACGGCAGGCTAGAGTTTCACGAAAACGACATCGTAATCGACGTGGACAAGAATTCTATCGCAAGAAAAGATGATAAGCTTGATGGGTTTGATTCATTCTCCGAGCTGGAGCTACCTCCAATCATAACGAAGCCAACGAATTTGAAGAAAGAAAACAGAGTAACCAAACCCAGAAACAGAGGACGCACATTCGAAGAAGAACCCCGAGAACAGCGGAATCTGAAAGTCAAGATTTTGACGGAAGACGTGGCGGCGAACAGAGAACAGAAAACGACCCAGGTTCGGAGATTCTCGGTTAGCTCGCCGGGAGTGAAGATTCGGCTGAATTCTCCGAGAATAAGTGGTCGGAAGAGTCAGGGGTATAGTGCCCGGAAAAGTGTGTCATCGTCGACGGCAGCGAGAAGCTCCCGGAGGAGCCTTTCCGATAGCTTTGCGGTGGTGAAGTCGTCGTTCAACCCACAGAAAGATTTCAGAGAGTCAATGGTGGAGATGATTGTGGAGAACAATATAAGAGCATCGAAGGACTTGGAAGATCTTCTTGCTTGCTACCTCTCTCTGAATTCAGATGAGTATCACGACCTCATCATCAAAGTGTTCAAGCAGATATGGTTTGATTTGACTGACACCCATTAG	1194	0.4606	MGNYRFRLSDMIPNAWFYKLRDMGKRKNQTLDKKKKKKKESLSSSTTSKTSKPKQPKQSTPRKSYYFTRELNDPTDRDRIFTSPPSPNPKVSVSDTNFPVTPRKPSSKQRPKRRTTTRTSPKLVSSSVSSSCHCRTTLDSVWTKSDSPPENSSSPFDSSVDSEFPEPEFRTDRVLPTELSFFDDNDCDGRLEFHENDIVIDVDKNSIARKDDKLDGFDSFSELELPPIITKPTNLKKENRVTKPRNRGRTFEEEPREQRNLKVKILTEDVAANREQKTTQVRRFSVSSPGVKIRLNSPRISGRKSQGYSARKSVSSSTAARSSRRSLSDSFAVVKSSFNPQKDFRESMVEMIVENNIRASKDLEDLLACYLSLNSDEYHDLIIKVFKQIWFDLTDTH	397

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco09g0363	397	NCBIfam	uncharacterized plant-specific domain TIGR01568	331	394	IPR006458	-
	Acco09g0363	397	MobiDBLite	consensus disorder prediction	293	321	-	-
	Acco09g0363	397	MobiDBLite	consensus disorder prediction	79	104	-	-
	Acco09g0363	397	MobiDBLite	consensus disorder prediction	44	66	-	-
	Acco09g0363	397	MobiDBLite	consensus disorder prediction	118	160	-	-
	Acco09g0363	397	MobiDBLite	consensus disorder prediction	238	258	-	-
	Acco09g0363	397	Pfam	DNA-binding domain	1	52	IPR025830	GO:0003677
	Acco09g0363	397	PANTHER	TRANSCRIPTION REPRESSOR OFP7-RELATED	42	394	IPR038933	GO:0045892
	Acco09g0363	397	MobiDBLite	consensus disorder prediction	22	43	-	-
	Acco09g0363	397	Pfam	Transcriptional repressor, ovate	337	393	IPR006458	-
	Acco09g0363	397	MobiDBLite	consensus disorder prediction	22	169	-	-
	Acco09g0363	397	ProSiteProfiles	OVATE domain profile.	333	392	IPR006458	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco09g0363	Acco-ChrAcco09	4609773	4610966	Dispersed/Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	OFP	Acco09g0363		Ovate	3.5e-24	No_clan