Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0361 ATGTTTCAGACGATTCGACAAATGAACAGAATTATTGACATTGAAGAAAGAGCAGCAGAATCTATTTCTTCTTGTCCAGTGGGAGAAGAGAAACTAGAGGGTGTTTTGTTTGGAAAATACGAAATCCGCAGATTCCTCGGCGTCGGAGGTTTCGCTAAGGTTTACGAAGCTTGTCATGTTGTTACGAAACAGAGTGTCGCCATTAAAGTAGTGAGCAAGCGCGACCTGAGAGAGCGCGGCCTTATGGCTCAGTTTCAGACGGAAATCACCGCCATGCGCCGGCTAAATCATCCGCACATCGTGAAGCTCTACGAGGTCCTCGCCACCAAAACCAAGATTTTCCTCGTCATTGAGTTTGCAAAAGGCGGCGAGCTCTTCGACAAATTCGTTAACGTTGGTCCCTTTGGCGAAGATCAGCACCGTCGGTGGTTCCAACAGTTAATCTCAGCCGTCCAGCACTGCCATTCTCGCGGCGTATTTCACCGCGATTTGAAGCTTGATAACCTCCTGCTCGACGAGGATTTGAACATCAAGGTTTCGGACTTCGGGCTGAGCGCTACCACGAATGATATCCGACTCGACGGGAAGCTTCATGCTTTCTGTGGGACCCCTGCTTACTTGGCCCCTGAGATGCTAAACGACAAAGGCTACGACGGAGATAAAGTCGATGTGTGGCAGTGCGGCGTCGTTTTGTACGTCCTCACGTTCCAGTCTTTGCCGTTTACCGGCCCGAACGTCCGAACGCAATTGAGGAGAATTTACCGAGGCGAGGTTCGGATCCCCCGTCGGGGCAAGCCCGAGAATTTGACACATTTAATCAAACGGTTGCTAGATCCGAACGCGAAAAGGAGAATTACGATTGATGAAATTCTGAAAGACCCTTGGTTCAAAAAAGGGTACACAGAAATCAAAGTCAAGCAGAAGAATCTAGAATGGGAGGATGAGAATAGACCCAAGTCTTTGAACGCTTTCCATTTGATATCGTTCGGGTCGGGTTTCGACATGTCTGGTTTGTTCACTGACCGCCCTGAACCGGAATTTTCGGGCAGCGTGGAACGCATCGTTTCGAAGGAGACGCCGAGGAGGATCGTGGAGATTGTGGAGGCGGCAGCTGATCGGGATATAGTAACTGTGACCAGAAAGGAGGACGGAATGGGAGCTAAGCTTGAGGGGCATAATGGTATTTTCGTGATATTGATCGGGGTTTACCGGCTAACGGATGAGCTGGTTGTAATTGAGGTAAAGAAGAAAGAAGAAGATGGTGAAATTGGTGCACGATTCTGGAGAGATAAATTGAGGCCTCGAATTATAGAATTAGAGCATAAACCGGAATAA 1335 0.4861 MFQTIRQMNRIIDIEERAAESISSCPVGEEKLEGVLFGKYEIRRFLGVGGFAKVYEACHVVTKQSVAIKVVSKRDLRERGLMAQFQTEITAMRRLNHPHIVKLYEVLATKTKIFLVIEFAKGGELFDKFVNVGPFGEDQHRRWFQQLISAVQHCHSRGVFHRDLKLDNLLLDEDLNIKVSDFGLSATTNDIRLDGKLHAFCGTPAYLAPEMLNDKGYDGDKVDVWQCGVVLYVLTFQSLPFTGPNVRTQLRRIYRGEVRIPRRGKPENLTHLIKRLLDPNAKRRITIDEILKDPWFKKGYTEIKVKQKNLEWEDENRPKSLNAFHLISFGSGFDMSGLFTDRPEPEFSGSVERIVSKETPRRIVEIVEAAADRDIVTVTRKEDGMGAKLEGHNGIFVILIGVYRLTDELVVIEVKKKEEDGEIGARFWRDKLRPRIIELEHKPE 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0361 444 ProSitePatterns Protein kinases ATP-binding region signature. 46 69 IPR017441 GO:0005524
Acco09g0361 444 ProSiteProfiles NAF domain profile. 316 340 IPR018451 GO:0007165
Acco09g0361 444 Gene3D Transferase(Phosphotransferase) domain 1 122 320 - -
Acco09g0361 444 FunFam Maternal embryonic leucine zipper kinase 31 325 - -
Acco09g0361 444 Pfam Protein kinase domain 40 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0361 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Acco09g0361 444 FunFam Aurora kinase A 34 123 - -
Acco09g0361 444 Gene3D Kinase associated domain 1, KA1 321 440 - -
Acco09g0361 444 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 33 417 - -
Acco09g0361 444 CDD CIPK_C 322 434 - -
Acco09g0361 444 ProSiteProfiles Protein kinase domain profile. 40 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0361 444 Pfam NAF domain 318 376 IPR004041 GO:0007165
Acco09g0361 444 SUPERFAMILY Protein kinase-like (PK-like) 36 309 IPR011009 -
Acco09g0361 444 Gene3D Phosphorylase Kinase; domain 1 37 121 - -
Acco09g0361 444 SMART serkin_6 40 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0361 Acco-ChrAcco09 4576329 4577663 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0361 35 437 CBL-interacting serine-threonine protein kinases AT2G30360 50.976 1.50e-135 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Acco09g0361 Pkinase 4.9e-67 CL0016