Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0347 ATGAGTGTTGCCGCCCCTGGGCAGCTGAACCTTACTGAGTACCCTGCATGGGGATCCAGAAGTGTTGATTGTTTTGAAAAGTTGGAGCAGATTGGCGAGGGAACTTACGGCCAAGTTTACAAGGCTAGAGAAATCGAAACAGGCGAACTTGTTGCTTTGAAGAAAATAAGAATGGAAAATGAGAGAGAGGGGTTTCCCATAACTGCCATTCGGGAAATCAACATTTTAAGGAAATTAAAACATGAAAATATTATTAAGCTGAAAGAGGTAGTGACATCACAAGGCCCTGAGAAAGGTGAGCAAGGGGAGCCAGATGGTAACAAATATAAAGGTGGTATCTATATGGTATTTGAATACATGGAACATGATTTGACTGGTCTTGCTTATCGACCTGGGATGAGATTTTCAGTTCCTCAAATCAAGTGTTATATGGTACAGCTTTTGAAGGGGCTTCATTATTGTCATGCAAGTCAAGTACTTCATCGTGATATAAAAGGATCCAATCTTCTTATAGACAATGAAGGTAATCTGAAGCTTGCAGATTTTGGACTTGCACGTTCACTTTGTAAAAGCCACAGTAACATACTCACAAATCGTGTCATCACATTATGCAACAGGCCCCCAGAGCTGCTGCTAGGAGCAACAAAGTATGGGTCTGCCGTTGATATGTGGTCAGTTGGATGCATCCTTGCTGAACTTCTTCATGGCAAGCCTATCTTCTTTGGAAAGGATGAGCCAGATCAACTAAACAAAATTTTTGAGCTGTGTGGAGCACCTGATGACGTGAACTGGCCTGGGGTTTCAAAGTTACCATGGTATAATTATTTTAAGCCAAGAAGACCAATGAAAAGACGCCTGAGAGAATATTTCAAACATTTTGATCATCATGCTTTAGATTTGTTGGAGAGGATGCTGACACTTGATCCTGCTCAGAGAATTAGTGCTAAGGATGCACTTGATGCTGAATATTTCTGGAATGAACCATTTCCATGCGATCCGAAGAGTTTACCCAAATATGAGTCATCACATGAGCTCCAGACAAAGAAAAGGCGCCAGCAACAGCGAGAACGTGAAGAGAATGCTAGACGTCAGAGAATGCAGCAACCCCAGCAACACACTCATCCTCCCCCCATTCAGCAGCCCGGGCCATCACACACCCGAATGCGCCCAGCTCTAAACCCAACAACGTCTGGCCCGCAGCCTGCAGGGCCGAGCCATCATTATGGGAGGCCTCCAGGTCCCTCAGGTGGGCCTGGAAGATACCCTCCATGGGGGAATCCTGGTGGGGGATACAATCACCCAAACCATGGAGGTCAAGGTGGTGGAGGTGGTTATGGCAGTGGACCGTTTCCTCCTCAAGGCCGGGGAGCACCTTATCGGTCAAGTGGTATGCCTGTCGGTGGTCCTCGTGGTGGCAGCTATGGAGTTGGAACGCCGAATTATCCTCAAGGCGGTCCATACGGCGGATCAGGAGCTGGCTTTGGTCCAAACATGATGGGTGGAAACTGCAATCAACATTATGGTTGGTAG 1530 0.4647 MSVAAPGQLNLTEYPAWGSRSVDCFEKLEQIGEGTYGQVYKAREIETGELVALKKIRMENEREGFPITAIREINILRKLKHENIIKLKEVVTSQGPEKGEQGEPDGNKYKGGIYMVFEYMEHDLTGLAYRPGMRFSVPQIKCYMVQLLKGLHYCHASQVLHRDIKGSNLLIDNEGNLKLADFGLARSLCKSHSNILTNRVITLCNRPPELLLGATKYGSAVDMWSVGCILAELLHGKPIFFGKDEPDQLNKIFELCGAPDDVNWPGVSKLPWYNYFKPRRPMKRRLREYFKHFDHHALDLLERMLTLDPAQRISAKDALDAEYFWNEPFPCDPKSLPKYESSHELQTKKRRQQQREREENARRQRMQQPQQHTHPPPIQQPGPSHTRMRPALNPTTSGPQPAGPSHHYGRPPGPSGGPGRYPPWGNPGGGYNHPNHGGQGGGGGYGSGPFPPQGRGAPYRSSGMPVGGPRGGSYGVGTPNYPQGGPYGGSGAGFGPNMMGGNCNQHYGW 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0347 509 MobiDBLite consensus disorder prediction 335 479 - -
Acco09g0347 509 SUPERFAMILY Protein kinase-like (PK-like) 18 332 IPR011009 -
Acco09g0347 509 Pfam Protein kinase domain 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0347 509 CDD STKc_CDK9_like 25 324 - -
Acco09g0347 509 FunFam Cyclin-dependent kinase C-2 12 121 - -
Acco09g0347 509 Gene3D Phosphorylase Kinase; domain 1 12 121 - -
Acco09g0347 509 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Acco09g0347 509 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Acco09g0347 509 SMART serkin_6 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0347 509 FunFam Cyclin-dependent kinase C-2 122 364 - -
Acco09g0347 509 Gene3D Transferase(Phosphotransferase) domain 1 122 364 - -
Acco09g0347 509 PANTHER CELL DIVISION PROTEIN KINASE 23 330 - -
Acco09g0347 509 MobiDBLite consensus disorder prediction 337 365 - -
Acco09g0347 509 ProSiteProfiles Protein kinase domain profile. 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0347 Acco-ChrAcco09 4407973 4412655 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0347 1 481 Core Cell Cycle Gene Families AT5G10270 71.370 0.0 679
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Acco09g0347 Pkinase 2e-71 CL0016