Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0336 ATGGCTTCTAGGGGGCGAAAGAAAGCTTCTCTTCAACACAAGTTACAACAGCTTCGAGATGTCACAAATTCTAGTGCTGTGAATAAGGCCTCAATTATTGTGGATGCATCCAAATACATAGAAGAGTTGAAGCAAAAAGTGGAGGGACTCAACGCAGAACTTGGAAGCAGCAGCAACAACAATAATATCAATGAATCTTCATCCTCCTCCTCCTCCCAAAATCAATTACCTAAGGTGACAGTGGAAACCCTAGAGAGTGGTTTTCTGATAAATGTGTTTTCTGAAAGGAATTGCCCAGGAATGTTAGTTTCGATACTGGAAGCCTTTGAAGTGCTTGGACTTGAAGTGCTTGATGCTAGGGTTTCTTGTGAAGACGCCTTTCAACTTGAAGCCGTGGGAGGAGAAAGCCAAGAGATCGATGAGAACATAGATGCACAAGTGGTGAAGCAGGCGGTACTTCAAGCAATAAAGGACATGGAGTGA 483 0.4327 MASRGRKKASLQHKLQQLRDVTNSSAVNKASIIVDASKYIEELKQKVEGLNAELGSSSNNNNINESSSSSSSQNQLPKVTVETLESGFLINVFSERNCPGMLVSILEAFEVLGLEVLDARVSCEDAFQLEAVGGESQEIDENIDAQVVKQAVLQAIKDME 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0336 160 Coils Coil 33 60 - -
Acco09g0336 160 MobiDBLite consensus disorder prediction 55 76 - -
Acco09g0336 160 Gene3D - 2 61 IPR036638 GO:0046983
Acco09g0336 160 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 157 - -
Acco09g0336 160 Coils Coil 152 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0336 Acco-ChrAcco09 4208390 4209922 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0336 1 135 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 30.864 1.15e-09 53.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g0336 09 4208390 4209922 Acco09g0336 09 4208390 4209922 ECH
Acco09g0336 09 4208390 4209922 Acco05g1642 05 32811856 32819740 ECH
Acco10g1506 10 28811414 28812676 Acco09g0336 09 4208390 4209922 ECH
Acco09g0336 09 4208390 4209922 Acco10g1506 10 28811414 28812676 ECH