Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0314 ATGGATGATCGCTGGTTTTCTTCTTCTTCTTCTTCTGAAATCCCTAAATTCAAGTCAACCCCACCCCCTTCATTGCCCCTTTCTCCTTCGCCTCTCTCTCCCTCTTCTTATTTTGCTTTCTCTTCTTCTGGGTTTAGCCCTACCCAGTTATTGGCGTCTCCCTTGTTCCTTCAATCCCCAAATGTTTTTCCTTCTACTGAGACGCTTAATAATAAAAAAGAGGAGGAGCAGAAACCGTTCTTTGACTTCTCCTTCCAAACCCAACAATCCAAGCCGTCGTCTTTCTCGGAATATTCTTCCACCATGTTTCAATCGGAACCACTGAAACAAGAGCCATGGAACGAGAAGACAGCCACCAAATCTGAGTATCCATCAACTCAGACCTTCTCCTCAGAACCACAGATACAAAGCAATAATAATAATATGGCTCCTGCTTCTGGTTATACTAACTACTCAAATTCGTCGCAGTCCATTAGAGAACAAAAGAGGACAGATGATGGGTATAACTGGAGAAAATATGGGCAGAAACAGGTGAAGGCGAGCGAAAATCCTCGAAGTTATTACAAGTGCACTCACCCGAGTTGCAACATGAAGAAGAAGGTTGAGAAGTCTCCGGATGGACAAATTACTGAGATAGTGTATAAGGGAACACACAACCATCCCAAGCCTCAGTCCACTAGAAGATCTTCTAGTTCTCAATCAATTCAGCCTTCTTCCTCTTGTAACAATTCCGGGATTTCCGATCAATCGGCTGTGACCCTAGGGAATCTGCAGATGGAGCCGGCCTCTTTGCAAGAAGATTCTTCTGTCTCTGTTGGAGAAGATGACTTTGAGCACACATCACAAACATGTTACTCTGGGGGCGATGACAATGACTTTGGTCCTGATGCCAAAAGATGGAAAGGAGAGAATGAAATTGATGCCTATGCCTCCTCTGCGAATAGAACTGTGAGGGAACCAAGAGTTGTAGTTCAAACTACAAGTGAAATTGATATTCTTGATGATGGTTACAGATGGAGGAAATATGGTCAGAAAGTAGTTAAAGGAAATCCAAACCCAAGGAGTTACTACAAGTGCACAGCTCAAGGGTGTTCGGTGAGGAAACATATTGAGCGAGCTGCTCATGATATGAAAGCTGTGATCACAACCTACGAAGGGAAACACAGCCATGATGTTCCTGCGGCACGAGGGAGTGGGAATTATGTGAATGCTGCTTCTCTGAACAGCAACCCCCCCAGCAACAATGTAACTGCACCTATAAGGCCATCGGCCTCTTCCGCCGCTGTGTTGACCAGCTATCCCGGCAAATCGAGTTTCACAAATTCGTTTCACAACACAAGCCAACCAACAACAACATCTACAAGTCAAGAGCCATTCCCATTTGACATGTTGCAGAGCCCAGCAAGTTTTGCATACTCTGATTTTGTTAGATCAATGGGATCGTATAACCCTAATGCATAA 1461 0.4442 MDDRWFSSSSSSEIPKFKSTPPPSLPLSPSPLSPSSYFAFSSSGFSPTQLLASPLFLQSPNVFPSTETLNNKKEEEQKPFFDFSFQTQQSKPSSFSEYSSTMFQSEPLKQEPWNEKTATKSEYPSTQTFSSEPQIQSNNNNMAPASGYTNYSNSSQSIREQKRTDDGYNWRKYGQKQVKASENPRSYYKCTHPSCNMKKKVEKSPDGQITEIVYKGTHNHPKPQSTRRSSSSQSIQPSSSCNNSGISDQSAVTLGNLQMEPASLQEDSSVSVGEDDFEHTSQTCYSGGDDNDFGPDAKRWKGENEIDAYASSANRTVREPRVVVQTTSEIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTAQGCSVRKHIERAAHDMKAVITTYEGKHSHDVPAARGSGNYVNAASLNSNPPSNNVTAPIRPSASSAAVLTSYPGKSSFTNSFHNTSQPTTTSTSQEPFPFDMLQSPASFAYSDFVRSMGSYNPNA 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0314 486 MobiDBLite consensus disorder prediction 263 292 - -
Acco09g0314 486 SUPERFAMILY WRKY DNA-binding domain 160 223 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco09g0314 486 Gene3D WRKY domain 320 386 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco09g0314 486 FunFam WRKY transcription factor 33 320 386 - -
Acco09g0314 486 ProSiteProfiles WRKY domain profile. 328 393 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco09g0314 486 SMART WRKY_cls 333 392 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco09g0314 486 SMART WRKY_cls 164 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco09g0314 486 MobiDBLite consensus disorder prediction 219 248 - -
Acco09g0314 486 MobiDBLite consensus disorder prediction 81 158 - -
Acco09g0314 486 MobiDBLite consensus disorder prediction 62 248 - -
Acco09g0314 486 Gene3D WRKY domain 149 224 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco09g0314 486 MobiDBLite consensus disorder prediction 263 288 - -
Acco09g0314 486 SUPERFAMILY WRKY DNA-binding domain 325 393 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco09g0314 486 MobiDBLite consensus disorder prediction 438 460 - -
Acco09g0314 486 Pfam WRKY DNA -binding domain 165 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco09g0314 486 Pfam WRKY DNA -binding domain 334 390 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco09g0314 486 FunFam WRKY transcription factor 152 224 - -
Acco09g0314 486 MobiDBLite consensus disorder prediction 1 30 - -
Acco09g0314 486 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 55 431 IPR044810 GO:0003700
Acco09g0314 486 ProSiteProfiles WRKY domain profile. 159 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0314 Acco-ChrAcco09 3812852 3814931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0314 159 465 WRKY Transcription Factor Family AT2G38470 56.329 5.92e-106 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco09g0314 WRKY 6e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g0314 09 3812852 3814931 Acco09g0314 09 3812852 3814931 ECH