Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0296 ATGGGAAACAATAATCGGTTTTCCGACAAGTTTCCCACAAATGATGGAAGACCCATTTCTCGTTTCATCGTCTCCTTCGTTCTGTTTCTTCAAGTTCTGACATTCACGTTTCAGCCAGTCTCAGGAGGAGGCCATGCATGGGATGGTGTGATTGTTACACAAGCTGATTATCAAGCTCTGAGAGCTATAAAGCAAGAGTTCGTAGATCTCAGAGGAATTCTAAGGAGCTGGAATGACAGTGGAATTGGAGCTTGTTCTGGTGGGTGGGCAGGAATCAAGTGTGCGAAGGGACAGGTTATTGCAATCCAGCTTCCATGGAGGGGATTAGGTGGTCGAATCTCGGAGAAAATCGGATCGCTTCAAGCTATTAGGAAGCTCAGTTTACACGACAATGTATTAGGTGGTCCTGTCCCTTGGTCTCTTGGCTTCCTTCCTAATCTCAGAGGAGTCTACCTCTTCAACAATAGGCTTTCAGGTTCTGTTCCTCCTTCTATTGGCAGAAATAGCCCAATGCTTCAGTCTATTGATTTTAGCAATAATTCTCTCTCAGGTACTATCCCTCCTAGCTTAGCAAACTCTACTAGATTATATAGACTCAATTTGAGCTTTAACTCTTTTTCTGGGTCAATTCCTAAAACTTTCACGATGTCTCCTTCTTTAACTATTCTTGCTCTTGAATACAACAATCTTTCTGGTTCTATCCCTGATTCTTGGGGTAGAGGAATGGGAAATAACCAATCTTTCAATCTTCAAATCTTGACCCTTGATCACAATCTCATTTCTGGACACATTCCTGTTTCTTTGAGTAAGATGGGTTTTCTCCAAGATATTTCTCTGAGCCACAATCAGATTAAAGGGGCTATTCCAAGTGAGCTAGGTGGGCTTTCTAGGCTTCAAAGTCTTGATCTATCAAACAATGGCATTAATGGTAGCTTTCCTGGTAATTTTGATAGGTTGAAAAGCCTTACTGTGCTTAACCTGAAGAATAATAAGCTTGAGGGTGAGATCCCATCAACAATTGGGAATATCTCTGGAATCACCCAGATTGATTTCTCTGATAATAAACTTGTGGGTGAGATTCCAGATTCACTTACCAAACTTGCAAATTTGATCTCTTTTAATGTTTCCTACAACAATTTGTCTGGCATTGTCCCATCCCTTCTCTCCAAAAGATTCAATTCTAGCTCTTTTGCTGGGAATCTCCAACTCTGTGGATATATCCCTTCAAAACCATGTCCTTCTTCTTCATCATCCACACCTCAGAATCCTCCATCTCCATCACCAAAACCTTCATTGAACCCACATCATGGTCGAAAACTAAGCACCAAGGACATAATCCTCATAGTAGCAGGTGCTCTTCTTGTGATTCTTCTTCTACTTTGCTGCTTTTTGCTTTGTTGTTTGGTCAGGAAAAGATCAGCCTCAAAAAAAGAAAAGAATGGGAACAATAATGCCAAAACATCATCAACTGCTGCTAGTACTGCAAGAAAAGGAGGTGAAGTTGCATCAGGAGGTGAAGCAGGAGGGAAGCTAGTTCACTTTGATGGTCCATTTGTTTTTACAGCTGATGATCTCTTGTGTGCTACTGCTGAGATTATGGGGAAAAGTGCTTATGGAACAGCATATAAAGCAACACTTGAGGATGGGAACCAGGTTGCTGTGAAGAGGCTGAGAGAGAAGACAACCAAAGGCCAGAAGGAGTTTGAAACTGAGGTTGCTGCACTTGGCAAGATTAGACACCTAAATCTGTTGGCACTTAGAGCATACTACTTGGGACCAAAGGGAGAGAAGCTTCTTGTGTTTGATTACATGGCCAAAGGAAGCCTAGCATCATTCCTCCACGCTAGGGGCCCGGAAATTGTCATAGACTGGCCAACAAGGATGAGGATAGCCATTGGAGTGACACGTGGCTTATGCTACCTACATACGCAGGAGAACATAGTACATGGAAATCTGACCTCAAGCAACATACTCTTGGATGAGCAGACAAATGCACATATCACAGACTTTGGTCTCTCAAGACTAATGACCACATCAGCAAACAGCAACATCATAGCCACAGCAGGAAACCTTGGTTATAATGCACCAGAGCTCACAAAGACCAAGAAACCAAACACAAAAACTGATGTTTATAGCCTTGGAGTCATTACTTTGGAGCTCTTGACTGGAAAACCACCTGGTGAACCAACCAATGGCTTGGACTTGCCCCAGTGGGTTGCTTCCATAGTTAAAGAAGAATGGACTAATGAAGTGTTTGATTTGGAGCTCATGAGGGATGCACCAACTATTGGTGATGAACTGCTTAATACTCTGAAATTAGCTCTTCATTGTGTGGATCCGTCCCCAGCTGCTAGGCCTGAAGTTCAACAGATTCTTCAACAACTGGAGGAGATCAAACCAGATTCTTCAGTGGATGATGGAGCAAAAGCCCCAGAAACTGAGTAA 2445 0.4266 MGNNNRFSDKFPTNDGRPISRFIVSFVLFLQVLTFTFQPVSGGGHAWDGVIVTQADYQALRAIKQEFVDLRGILRSWNDSGIGACSGGWAGIKCAKGQVIAIQLPWRGLGGRISEKIGSLQAIRKLSLHDNVLGGPVPWSLGFLPNLRGVYLFNNRLSGSVPPSIGRNSPMLQSIDFSNNSLSGTIPPSLANSTRLYRLNLSFNSFSGSIPKTFTMSPSLTILALEYNNLSGSIPDSWGRGMGNNQSFNLQILTLDHNLISGHIPVSLSKMGFLQDISLSHNQIKGAIPSELGGLSRLQSLDLSNNGINGSFPGNFDRLKSLTVLNLKNNKLEGEIPSTIGNISGITQIDFSDNKLVGEIPDSLTKLANLISFNVSYNNLSGIVPSLLSKRFNSSSFAGNLQLCGYIPSKPCPSSSSSTPQNPPSPSPKPSLNPHHGRKLSTKDIILIVAGALLVILLLLCCFLLCCLVRKRSASKKEKNGNNNAKTSSTAASTARKGGEVASGGEAGGKLVHFDGPFVFTADDLLCATAEIMGKSAYGTAYKATLEDGNQVAVKRLREKTTKGQKEFETEVAALGKIRHLNLLALRAYYLGPKGEKLLVFDYMAKGSLASFLHARGPEIVIDWPTRMRIAIGVTRGLCYLHTQENIVHGNLTSSNILLDEQTNAHITDFGLSRLMTTSANSNIIATAGNLGYNAPELTKTKKPNTKTDVYSLGVITLELLTGKPPGEPTNGLDLPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPAARPEVQQILQQLEEIKPDSSVDDGAKAPETE 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0296 814 Gene3D Phosphorylase Kinase; domain 1 533 604 - -
Acco09g0296 814 SMART LRR_typ_2 271 294 IPR003591 -
Acco09g0296 814 SMART LRR_typ_2 367 390 IPR003591 -
Acco09g0296 814 SMART LRR_typ_2 295 318 IPR003591 -
Acco09g0296 814 SMART LRR_typ_2 144 168 IPR003591 -
Acco09g0296 814 SMART LRR_typ_2 319 343 IPR003591 -
Acco09g0296 814 CDD STKc_IRAK 533 798 - -
Acco09g0296 814 Pfam Leucine rich repeat N-terminal domain 55 94 IPR013210 -
Acco09g0296 814 MobiDBLite consensus disorder prediction 477 501 - -
Acco09g0296 814 FunFam Pollen receptor-like kinase 1 604 809 - -
Acco09g0296 814 Pfam Leucine rich repeat 249 308 IPR001611 GO:0005515
Acco09g0296 814 FunFam Leucine-rich repeat receptor-like protein kinase 512 603 - -
Acco09g0296 814 Gene3D Ribonuclease Inhibitor 310 416 IPR032675 -
Acco09g0296 814 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 241 416 - -
Acco09g0296 814 MobiDBLite consensus disorder prediction 417 431 - -
Acco09g0296 814 PRINTS Leucine-rich repeat signature 298 311 - -
Acco09g0296 814 PRINTS Leucine-rich repeat signature 319 332 - -
Acco09g0296 814 Gene3D Transferase(Phosphotransferase) domain 1 605 810 - -
Acco09g0296 814 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 53 237 - -
Acco09g0296 814 MobiDBLite consensus disorder prediction 412 436 - -
Acco09g0296 814 ProSiteProfiles Protein kinase domain profile. 527 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0296 814 SUPERFAMILY Protein kinase-like (PK-like) 531 799 IPR011009 -
Acco09g0296 814 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 249 798 - -
Acco09g0296 814 MobiDBLite consensus disorder prediction 480 496 - -
Acco09g0296 814 SUPERFAMILY L domain-like 93 404 - -
Acco09g0296 814 Pfam Protein tyrosine and serine/threonine kinase 531 795 IPR001245 GO:0004672|GO:0006468
Acco09g0296 814 Gene3D Ribonuclease Inhibitor 215 309 IPR032675 -
Acco09g0296 814 Gene3D Ribonuclease Inhibitor 53 214 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0296 Acco-ChrAcco09 3618279 3621321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0296 45 800 Receptor kinase-like Gene Family AT3G51740 65.473 0.0 977
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Acco09g0296 PK_Tyr_Ser-Thr 4.3e-40 CL0016