Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0285 ATGAGTAGCCTTCTTCTCTTAGTATTATTGTGCCTTCACATCACAGCAAGAGCTTCCATGGCGGCCACAGATGAGCAGAATAAGAGACTAATTCCAGTAGGAGTCATTCTTGATCTGAATTCAACACTTGGTTCCATGGTCTACGGCAGCCTCGCCCTCGCCCTCGAAGATTACTATTCCGTTCATACGGATACAGCCACCAAGATCGACCTTAAAGTCAAGAATGCTTCTCACGACGACGTCCTCGATGCCGCAAAAGCAGCTTGGGATCTAGTGACAAAGGAAAATGTGACGGCAATCCTGGGACCTGAAAACTCTGAGGAAGCAAGGTATGTTGTAGATCTCGGTGACAAATATGATGTTCCTGTGATTTGGTTTTCTCCTTCTGGTCCATCTCTATTGCCACCTCGTACCCGGTTCTTCATCACCTCCAACTCCACCAGAAGCCATTGCTCTCAGTTCGAAGCTATAGCTGCCATTATCAAAGCTTATAATTGGCAGTCTGTGATCCCCATTTATGAAGAACCTCAATTCGGCGATGACCTGATTCCATGTCTCTATTATGCCTTGCAAGACATGGACACTCAAGTGCCTTACATAAGTGCCATTAATCAAAACTTCTCAAATCGTCGAATCACCGACGAACTTAAGAAGATCAAAGACAAGCGAACATATGTGTTTGTCGCCCATATGACGGTGGAGCTTTGGTCAAGACTTGTGCAACGTGCAAAATCTGCAGGGCTGGTTGATAAAGGATACGCTTGGATACTTACGCAAGGCCTATCTTCTGTGCTAGATCCCGAAGCTTTAAATATAAAAGCGAAAGGCTACATGGATGGTGCTTTGGGTGTGAGGCCATCATTGGCTGATTCCAACATAACCAAGCGAGTTGACTTAAGGACAAGATTAAAATCTGAGCACAATAAAAGTCTGTCTCTATATGGCCTGTGGGCTTATGACACTATCACAGCATTGGCCAATGCAGTTGAGAATGCCGGCTTATCCAATTCTGATGAAAGCAGAAGTGATCTTCGCAGAGCAATTCAGTTACAGAATTTCACAGGTCTGGCAGGGAATTTCAATTTGAGGCTAGGACAATTAGAACCATCACAAGTTGTAATATATAATGTGCAAGACAGAAGATACATGAACTTTGGACTTTGGAGCCATGAAAGAGGACTTACTGTTCTTTATGACAGGGTAGTATGGCCGGGTAAAACAACCGAGAGACCACCAAAGTTGAAAATTGGGGTCCCAGAAACGCATTTTACTGAATTTGCTGATTTTGCTGTTGAAGCGTTTAAAAAAGTGGTTGATGTTTTGCCATTTCATTTACATTATGAGTCTGTGCCCCTGAACAGGGATGTTGATGTTATAATTGGAGACATTACGGTTGTAGCAAGTCGCAAAAATTGTGTTGATTTCACAATGCCGTATTTAGATTCAAGAGTGTCAATGGTGGTAAAGGTGAGGTCCGACTCCGACTCCAAAAATGGTTTGATCTTTGTCGAACCATTTCGTCGGTCAATTTGGTTAAGTCTTGCTGTGGGTGTTGTGGGTGCAGCTGTTACTGACTCCTGGGTGAGAGATCTTCTGATTGACCAAATAAAATTGAAGGACCATCAGTTAAAGGCTTTAGAAAGTCTTGAGGAGTACAATGAAGCACTGCCAAATGGAACAGTGGGTGCTATTTTTGATGAAACTCCTTATCTCAGGCTTTTCCTTTCCAAACGCCCTTCTTGCAAGATGACAGGACCAATCTACAGGACTGGTGGATTTGCGTTTGCATTCCCAAAGAATTCAACCTTGGTCTCGAATTTCTCAGCTGCAATATTAAATGTGACTCAAAATGTGACAACATTTCGTGAGATGAAGAAGAGCATATCCTTACCCGACACCGTTGATAAATCCGAATACAAAAGTGATGTTGACATGCGAAGTTTGACGAAGGACGACTTTGGAGGTCTTTTCTCAATAGTATGGTCTGTTTTAGCTCTCTTCTTCGGCATTTTAATTCTTAAACTTCCATCTATCCCTGACTAG 2043 0.4293 MSSLLLLVLLCLHITARASMAATDEQNKRLIPVGVILDLNSTLGSMVYGSLALALEDYYSVHTDTATKIDLKVKNASHDDVLDAAKAAWDLVTKENVTAILGPENSEEARYVVDLGDKYDVPVIWFSPSGPSLLPPRTRFFITSNSTRSHCSQFEAIAAIIKAYNWQSVIPIYEEPQFGDDLIPCLYYALQDMDTQVPYISAINQNFSNRRITDELKKIKDKRTYVFVAHMTVELWSRLVQRAKSAGLVDKGYAWILTQGLSSVLDPEALNIKAKGYMDGALGVRPSLADSNITKRVDLRTRLKSEHNKSLSLYGLWAYDTITALANAVENAGLSNSDESRSDLRRAIQLQNFTGLAGNFNLRLGQLEPSQVVIYNVQDRRYMNFGLWSHERGLTVLYDRVVWPGKTTERPPKLKIGVPETHFTEFADFAVEAFKKVVDVLPFHLHYESVPLNRDVDVIIGDITVVASRKNCVDFTMPYLDSRVSMVVKVRSDSDSKNGLIFVEPFRRSIWLSLAVGVVGAAVTDSWVRDLLIDQIKLKDHQLKALESLEEYNEALPNGTVGAIFDETPYLRLFLSKRPSCKMTGPIYRTGGFAFAFPKNSTLVSNFSAAILNVTQNVTTFREMKKSISLPDTVDKSEYKSDVDMRSLTKDDFGGLFSIVWSVLALFFGILILKLPSIPD 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0285 680 PANTHER OS06G0188250 PROTEIN 6 371 - -
Acco09g0285 680 Gene3D - 150 326 - -
Acco09g0285 680 Gene3D - 327 516 - -
Acco09g0285 680 Gene3D - 528 627 - -
Acco09g0285 680 Pfam Bacterial extracellular solute-binding proteins, family 3 454 618 IPR001638 -
Acco09g0285 680 SMART GluR_14 413 632 IPR001320 GO:0015276|GO:0016020
Acco09g0285 680 Pfam Receptor family ligand binding region 49 379 IPR001828 -
Acco09g0285 680 SUPERFAMILY Periplasmic binding protein-like I 29 412 IPR028082 -
Acco09g0285 680 SUPERFAMILY Periplasmic binding protein-like II 410 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0285 Acco-ChrAcco09 3485144 3490980 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0285 559 674 Ion Channels AT5G27100 31.496 6.44e-06 47.8