Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0284 ATGGCGGACACGCGAATAGTACAAATAGGGGTCATTCTTGATCTGAGTTCAACACTTGGTAAAATGCTCAACGACAGCCTCGCCTTCGCGGTCGATGATTACTATTCCGTTCATACGGATACAGCCACCAAGATCAACCTTACCGTCTGTGATGTTCCTCAGAACGATGTGGTCGTTGCGGCAGGAGAAGCTAGTAATCTCATAAAGGAAGCCAAAGTGCGTGCCATATTGGGGCCCCAAAATTCAGAGCAAGCAAGGTATATAGTGAAGCGTGGTGCGAGAGAGGAAAACCAAGTACCTGTTATTTGGTTTCCCATGACTGGTCCGTCTCTTTTGCTACCTCCTTCCCCATCCTCCATCTACTCCGATGAAGGCCTTAACTGCTTTCAGTTCCGCGCTATAGCTGACATTATTAAAGCTGTTGGGTGGCAAACAATTGTCCCCATTTATGAAAAGACTGAATATGGCAGTCACCTTCTTCCATGCCTCTCCAATGTCTTGAAAGATATGGGCGTACAAATGGCTAACGTAACTGCCATTGCTTCACAAGTTGAAGGTATTAATAGCACTCTGGACAAGTTAAAAGACATGCGGACACATGTATTTCTTGTCCATATGAGCATGTATTGGGGAACAGAATTAATTTTGTCTGCAGGAAGAAAAGGGATGATGGGTGAAGGGTTTGCTTGGATACTCACCCAAGAGCTATCTTCCCTGACATATCCTCAAGTTGATATTATGAGAGAATTGCGTAATGCCGACCTATCTTCTGTTTTAACATACTTTGATGATCAAGTTCCTTTGACAATATACATGCAAGGTGCATTGGGAGTGAGGCCAAGGGATCCCGAAAGAACAAAAACAAGTGTGGCGAAAGAGACAAATTTCTCTAGAGCATTCAATAGTAGGCTAACTATCTATGGATGGTGGGCTTATCACACAATCGAAGCATTGGCTAAGGCAGTAGAGAAAGTAGAGAAGGCAGGCACAGACAATGGCCTAACACTTTGCGATGAAATTAAGGCTACTACTTTCACAGGCGTGTCAGGGGTAAAGTTTAATTTAAGTCAAGGACAACTAGATCAATCTGAGCTTGAAGTATACAATGTTGTAGGATACATGGAAAGGATCATCGGAAATTGGAGCCCTGGGAGGGGGCTGTTTCAAAATCAAAGTAGTAATGAAGGTGGTGAGACTGCTGGTGAATACAAGGTAAAGGATCCATTGTGGCCGGGTAACACATTGGATAAACCACCAAAGTTGAGAATTGGAGTCCCAACAAAAAATTCTTCTCCTCAATTAGTGAATGCTGATAATTCTCGTGAACGGCTCACGATTGTTGGCTTCGCCAAGAATGTGTTCTTAAAAGCTCTTGATTCTTTGCCCTTTCGGCCAAATAATTATGAGTTTGTTGCGTTGCCCGACATGACCTATGATGATATTCTCTGCAGCCAAATGAAAGAGAAGGCAAATGTTATGGAGATCAATTCAACAAGCAAAGCTGCAGCATGGATGTTGAAGGGTTTAGGAAGTCACGAAGAGTATGATGAAGAATTGTCAAGAGGCACTGAAAATGGAGGAGTGGATGCTATTTTTGATGAAACTCCTCATCTCACGCTCTTCCTCTCCCAGTACAAGCCTCGCTTTATGATGATTGGGCCTCTCTATCAAACTGGTGGATTTTCCTTTGCATTCCCAAAGAAATCTAATCTGGCCTCACATTTCTCGAATGCAATTTTAGATGTGGCTCATGATGTGGAGACATACTGTGTGTTGATGGCTAAGAGCTCCTTACCCACTTCCATTGAAGATTTGCAATTACAGGACCAAAAGTGA 1836 0.4319 MADTRIVQIGVILDLSSTLGKMLNDSLAFAVDDYYSVHTDTATKINLTVCDVPQNDVVVAAGEASNLIKEAKVRAILGPQNSEQARYIVKRGAREENQVPVIWFPMTGPSLLLPPSPSSIYSDEGLNCFQFRAIADIIKAVGWQTIVPIYEKTEYGSHLLPCLSNVLKDMGVQMANVTAIASQVEGINSTLDKLKDMRTHVFLVHMSMYWGTELILSAGRKGMMGEGFAWILTQELSSLTYPQVDIMRELRNADLSSVLTYFDDQVPLTIYMQGALGVRPRDPERTKTSVAKETNFSRAFNSRLTIYGWWAYHTIEALAKAVEKVEKAGTDNGLTLCDEIKATTFTGVSGVKFNLSQGQLDQSELEVYNVVGYMERIIGNWSPGRGLFQNQSSNEGGETAGEYKVKDPLWPGNTLDKPPKLRIGVPTKNSSPQLVNADNSRERLTIVGFAKNVFLKALDSLPFRPNNYEFVALPDMTYDDILCSQMKEKANVMEINSTSKAAAWMLKGLGSHEEYDEELSRGTENGGVDAIFDETPHLTLFLSQYKPRFMMIGPLYQTGGFSFAFPKKSNLASHFSNAILDVAHDVETYCVLMAKSSLPTSIEDLQLQDQK 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0284 611 PANTHER OS06G0188250 PROTEIN 3 372 - -
Acco09g0284 611 Pfam Receptor family ligand binding region 26 371 IPR001828 -
Acco09g0284 611 Gene3D - 562 585 - -
Acco09g0284 611 Gene3D - 133 331 - -
Acco09g0284 611 SUPERFAMILY Periplasmic binding protein-like II 484 583 - -
Acco09g0284 611 SUPERFAMILY Periplasmic binding protein-like I 6 382 IPR028082 -
Acco09g0284 611 Gene3D - 475 561 - -
Acco09g0284 611 Gene3D - 2 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0284 Acco-ChrAcco09 3472635 3478900 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0284 506 587 Ion Channels AT2G29120 42.683 8.51e-11 63.2