Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0282 ATGAAAAGACAGAATATGGCGGTCACCTTTCTTCCATACCTCACCAATGTCTTGAAAGCTATGGTCATACGAATGGATAACGTAACTGCCATTGATTCAGATTCAAAAGATTCTGAAATTAATAGCACTCTTGACACGTTAAATTCCACGCGGACACATGTATTTCTTGTCCATATGAGCATGGATCTTGGAACAAGATTTATTTTGTCTGCACAGGAAAAAGAGATGATGGGTGAAGGATATGCTTGGATGCTTACCCAAGAACTATCTTCTCTGACATATCCTCAACACATAAGATTACGAGAGCATGCCCATCGATCTTCTTTTTTAACAAATTTTGATGATCGAGTTCCTTTGACAAGATCCATGCAAGGTGCATTGCTAACTATCTATGGATGGTGGGCTTATCACACAATCGAAGCATTGGCTATGGCTTTAGAGAAGCCAGGCAGCACAGACAATGGCCAAACACCACGCAATGAAATTGAGGCTATTACTTTCACTGGCGTGTCAGGGATAGAGTTTAATTTACGACAAGGACAACTAGATCAATCTGAGCTTGAAGTATGGGTGTCAAGAGCTTCCATGGCGGCCACAGTTGAGCAGAAGAAAAGACTTATTCCAGTAGGAGTCATTCTTGATCTGGATTCAGCACTTGGTTCCATGGTCAACGACAGCCTCGCCCTCGAAGATTACTATGCCGTTCATACGGATACATCCACCAAGATAGATCATAAAGTCGAGAATTCTGTTCACAACGACGTCCTCGATGCCACAAAAGTAGCTTGGGATCTAGTAGAAAAGGAAAATGTGACGGCAATCCTGGGACCTGAAAACTCTGAGGAAGCAAGGTATGTTGTAGATGTTGCTGACACAAATTATGTACCTATGTTTTGGTTTTCTCCATCTGGCCCATCTCTACTGCCACCTGGTACCCGGTTTTTCATCACCTCCAGCCATTGCTCTCAGTTCGAAGCTAAAGCTGCCATTATCAAAGCTTATAATTGGCAGTCTGTGATCCCCATTTATGAAGAACCTCAATTCGGCGACGACCTGATTCCATGTCTCTATTATGCCTTGCAAGACATGGACACTCAAGTGCCTTACATAAGTGCCATTAATCAAAACTTCTCAAATGGTCGAATCACCGACGAGCATAAGAAGATCAAAGACAGGCGAACATGTGTTTGGTTGGTTAATGAAGGAGACGCTTGGATTCTTAGGCAAGGCCTATCTTCTGTGTTAGATCCCAAAGTTTTAAATATAAAAGCTTTGGGTGTGATGACATCATTGGCTGATTCCAACTTAACCAAGAAAGTTGACTTAGGGAGAAGATTAATGTCTGAGTACGGTAAAAATATGTCTCTATATGGCAAGTGGGCTTATGACACCATCACAGCATTGGCCAATGCAGTTGAGAAAGCCGGCTTAGCCAATTCTGATGAAAGCAAAGGTGATCTTCACAATGAAACAGGCCCGGAACTTCTCGAAAAAATTCTGTCGGAGAATTTCAAAGGTCTGTCAGGGAATTTCAATTTGAGGCTAGGACAATTAGAACCATCACAAGTTGTAATATACAATGTGCAAGACAAAAGAGACATCATCTTTGGACTTTGGAGCCATGAAACAGGACTAGTTCAAAATGACAGCGTAGAAGTTGAATGGCTGGGTAACGCAAAGGAGAGGCCACCAAAGTAG 1698 0.4229 MKRQNMAVTFLPYLTNVLKAMVIRMDNVTAIDSDSKDSEINSTLDTLNSTRTHVFLVHMSMDLGTRFILSAQEKEMMGEGYAWMLTQELSSLTYPQHIRLREHAHRSSFLTNFDDRVPLTRSMQGALLTIYGWWAYHTIEALAMALEKPGSTDNGQTPRNEIEAITFTGVSGIEFNLRQGQLDQSELEVWVSRASMAATVEQKKRLIPVGVILDLDSALGSMVNDSLALEDYYAVHTDTSTKIDHKVENSVHNDVLDATKVAWDLVEKENVTAILGPENSEEARYVVDVADTNYVPMFWFSPSGPSLLPPGTRFFITSSHCSQFEAKAAIIKAYNWQSVIPIYEEPQFGDDLIPCLYYALQDMDTQVPYISAINQNFSNGRITDEHKKIKDRRTCVWLVNEGDAWILRQGLSSVLDPKVLNIKALGVMTSLADSNLTKKVDLGRRLMSEYGKNMSLYGKWAYDTITALANAVEKAGLANSDESKGDLHNETGPELLEKILSENFKGLSGNFNLRLGQLEPSQVVIYNVQDKRDIIFGLWSHETGLVQNDSVEVEWLGNAKERPPK 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0282 565 SUPERFAMILY Periplasmic binding protein-like I 10 177 IPR028082 -
Acco09g0282 565 Gene3D - 319 346 - -
Acco09g0282 565 SUPERFAMILY Periplasmic binding protein-like I 207 540 IPR028082 -
Acco09g0282 565 Gene3D - 2 130 - -
Acco09g0282 565 Gene3D - 431 517 - -
Acco09g0282 565 PANTHER OS06G0188250 PROTEIN 192 523 - -
Acco09g0282 565 Pfam Receptor family ligand binding region 12 190 IPR001828 -
Acco09g0282 565 Pfam Receptor family ligand binding region 227 530 IPR001828 -
Acco09g0282 565 Gene3D - 240 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0282 Acco-ChrAcco09 3452622 3459979 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0282 205 550 Ion Channels AT4G31710 31.525 2.61e-44 167