Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0279 ATGCAGAAAAGGCGAAGAGGATCTCTCATATCTGTGAGCTTATTATTTTGCCTAGTTACCCTAACTCAGTCTGCAACTGAATCCATACCAGTTGGAGTGATTCTGGATTCGAATTCATCACTTGTCAACGCCACTCTCGACATCGCACTTCGAGATTTCTATGACACACATGATTCATATACAACCAGGCTCCAACTTCTTTTCAATATATCTGAAAACGATCTCGATGCAGCTTCTGCAGCTTGGGATCAAATATATAAGCAAAATGTGAGGGCAATCCTGGGACCTCAAAACTCAGATCAAGCAAGGTATGTTGTAGAACTCGGTGACGTTGCTGGGGTACCTGTGATTTGGTTTTCTCCATCTGGTCCTTCTCTTATGCCACCTCGTACCCGATTCTTCATCCACTCCAACTCCACCAGAAGCCATTGCTCTCAGTTCGACGCTATAGCTGCTATTATCAAAGCTTATAATTGGCAGTCCGTGATCCCCATTTATGAAGACCCTGAATTCGGCTATGACCTAATTCCATGCCTCTCTTATGCCTTGCAAGACATGGACACTCGAGTGCCTTACATAAGTGCCATAAATAAAAATTTCGCGGATCATAATATCACTGAGGAGCTTAACAAGATCAAAAACAAGCGAACACACGTGTTTGTTGCCCATATGACTGTGGAGATTTGGTCAAAACTCGTGGAACCTGCACAAAAGGCGGGGATGATGAGTAAAGGATACGCTTGGATACTTACACAAGGCCTTTCTTCTGTTCTAGATCCTGAAGCTTTAGATGTAACAGCCAAAGGCTACATGGATTGTGCTTTAGGTGTGAAGCCATCATTGAAACATTCCAGCATGAATAAGCGCATTTCGTTATCGACAACGTTAATGTCTAAGTACGGTAAAACTGTGTCTCTATATGGCCTCTGGGCTTATGACACTATCACAGCATTGGCCGAAGCGGTTGAGAATGCTGGCTTGGTCCATTATGACGTTGCAAATAGGGGAATGCACCATATAACAGGCCCAAAACTTCGAAAATTAATTATGAAAACTAATTTCTCAGGCCTGTCAGGGAATTTCAATTTGCCGCAGGGACAATTAGAACCATCAGAATTTGTAGTATACAATGTGAAAGGCCAAACAGAAAGGATCATTGGATATTGGAGACCCGAAACAGGACTTGATCAAAATAACAGTGAAGTAGTTGAATGGCCGGGTAACGCGGAGGAGAGACCACCAAAGCTAAAAATTGGGGTCCCAACAAAAGCGAATTTTATTGAATTTGCTAATGTTAGTGGAGAAGGGCAGAATATATCAGCTACTGGATTTGCTGTTGATGTGTTTAAAAAAGTGGTTGAGGTTTTGCCATTTCCTTTATCTTATGAGTTCGTGCCCGTACCCGTGCCCGTGGACAACACTAATGGATATCATGGTCTTCTCTGCAATATCACAGACAAGAATGTCAATGTCGATGTTATCATTGGAGACATTACGATTGTAGAGAATCGCACAGAATGTGTTGCTTTCACAATGCCGTATTTAGATTCAAGCGTGTCAATGGTGATAAAGGTGAGGTCCGACTCCAAAAATGGGTGGATCCTCCTCAAACCTTTTGATTGGAAACTTTGGCTAATTCTTGGTGTGATATTTGTGGTTGCAACTGTCATTGTAATTATATTGGAAGGAAAAGAAAAGGATGATAATGCTGGTGAAAGAAAATTCTGCCACTTTGTCCACAATCCCTTCCTTGTTTACATGAGCGATGTTGAGTCCTTGAGAAGTGGCAAGTCTAAATGGGTGGTGATAGTAGTCATGTTTGTGTTGACCATAGCAATGCAAGTTTACACAGCAAATTTAACAGCAAATTTATCAGAGAGGATAACAACAAAACCTTCTTCATCGAAGAACTTGCAAGAGATTAAAAGGAACAAAAAGCCAGTGGGGTATCAAAACAATTCCTGGGTGAGAGAGCTTCTTATTCACCAAATAGGATTGAAGGATGTTCAGTTAAAGCCTTTAAAAAATCTTACAGAATACGAAAAAGCATTATCAAATGAAGACAAAAATGGTGTGACTGTTGATGCGATTTTTGATGAAACTCCTTATCTCATGCTCTTGCTTTCCAATTGTTCTTCTTGCAAGATGACAGGACCAATCTATAAAGCTGGTGGATTTGCCTTTGCATTCCCAAAGAATTCTACGTTGGTCTCAAATTTTTCAGCTGCAATATTAGAAGTGACTCAAAATGTGAAGATGTTTCGTCACATGAAGGAGAACATAAATTTACCCACCACTGTTAACAAATCCGAATACAGAAGCGGTGTTGAGATGCGAAGTTTGACGAACGATGACTTTGGAGGCCTTTTTCCAATAGTGTACTCTGTTTTAGCTCTCTTCTTCACCATTTCAATTCTTAAAATTCCATATGTCGCTTCGCAGCTTAAAAAAGTTCCACCTATTGCTTTCCTGCAGAAAAAAGTTTCATCTATAGCGGTTTGGTTACATAACAAATTTGTTTCTTAA 2526 0.405 MQKRRRGSLISVSLLFCLVTLTQSATESIPVGVILDSNSSLVNATLDIALRDFYDTHDSYTTRLQLLFNISENDLDAASAAWDQIYKQNVRAILGPQNSDQARYVVELGDVAGVPVIWFSPSGPSLMPPRTRFFIHSNSTRSHCSQFDAIAAIIKAYNWQSVIPIYEDPEFGYDLIPCLSYALQDMDTRVPYISAINKNFADHNITEELNKIKNKRTHVFVAHMTVEIWSKLVEPAQKAGMMSKGYAWILTQGLSSVLDPEALDVTAKGYMDCALGVKPSLKHSSMNKRISLSTTLMSKYGKTVSLYGLWAYDTITALAEAVENAGLVHYDVANRGMHHITGPKLRKLIMKTNFSGLSGNFNLPQGQLEPSEFVVYNVKGQTERIIGYWRPETGLDQNNSEVVEWPGNAEERPPKLKIGVPTKANFIEFANVSGEGQNISATGFAVDVFKKVVEVLPFPLSYEFVPVPVPVDNTNGYHGLLCNITDKNVNVDVIIGDITIVENRTECVAFTMPYLDSSVSMVIKVRSDSKNGWILLKPFDWKLWLILGVIFVVATVIVIILEGKEKDDNAGERKFCHFVHNPFLVYMSDVESLRSGKSKWVVIVVMFVLTIAMQVYTANLTANLSERITTKPSSSKNLQEIKRNKKPVGYQNNSWVRELLIHQIGLKDVQLKPLKNLTEYEKALSNEDKNGVTVDAIFDETPYLMLLLSNCSSCKMTGPIYKAGGFAFAFPKNSTLVSNFSAAILEVTQNVKMFRHMKENINLPTTVNKSEYRSGVEMRSLTNDDFGGLFPIVYSVLALFFTISILKIPYVASQLKKVPPIAFLQKKVSSIAVWLHNKFVS 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0279 841 Pfam Receptor family ligand binding region 44 380 IPR001828 -
Acco09g0279 841 SUPERFAMILY Periplasmic binding protein-like I 25 414 IPR028082 -
Acco09g0279 841 SUPERFAMILY Periplasmic binding protein-like II 413 750 - -
Acco09g0279 841 Gene3D - 142 395 - -
Acco09g0279 841 Gene3D - 62 370 - -
Acco09g0279 841 SMART GluR_14 417 756 IPR001320 GO:0015276|GO:0016020
Acco09g0279 841 Pfam Bacterial extracellular solute-binding proteins, family 3 438 752 IPR001638 -
Acco09g0279 841 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 31 804 IPR015683 -
Acco09g0279 841 Gene3D - 411 538 - -
Acco09g0279 841 Gene3D - 731 750 - -
Acco09g0279 841 Gene3D - 628 730 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0279 Acco-ChrAcco09 3407331 3411969 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0279 21 804 Ion Channels AT2G29120 34.454 1.31e-126 402