Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0278 ATGCAGAGAAGACGAAGAGATTGTCTCTTACTATTTGTGGCCTTGTTTATATGCCTAATTACCCTAACTCAATCTGCAACTTTAAGAAGAGGTGGAGGAAGAAGACGCTTCCCTGTGGCTATACCAGTAGGAGTGATTCTGGATTTGGATTCATCACTTGGTTCGATGGCTCTCAACTGCACCAACATCTCACTCCAAGATTTCTATTCCACAAATGGTAACTATTCAACCAAACTCCAACTTCATTTTAGGCATTCTGGACAAGATCTCCTCACTTCAGCTTCTGCAGCTTGGGATCTAATAAATAACCAAAAGGTGCATGCTATAGTGGGACCTCAAAGCTCAGAGCAAGCAAGGTTTATTGTAGAACTTGGTAACAAGTCTAACGTACCCGTGATTTGGTTTTCTCCATCTGGTCCTTCTCTTATGCCAACTCGTTCCCGTTTCTTCATCCACTCCGAATCCACTGGAAGCCATTGCTCTGAGTTCGAAATTATAGCTGCCATTATTGAAGCTTATAATTGGCAGTCTGTGATCCCCATTTATGAAGACCCAGAATTTGGCAATGACTTAATTCCGTGTCTCACTTATGCCTTACAAGACATGGTCACTCAAGTGCCTTATAGAATTGCCATTAGTCAAAATTTCACAGATTCTCAAATCACCAACGAGCTTAACAAGATCAAAGACAAGAGAGCATATGTGTTTCTTGCCCATATGACCGTGGAACTTTGGTCTAGACTTATGAAACAAGTAAAAAAAGCAGGATTGATGAGTAAAAGATACACTTGGATACTTACAAAAGGCCTATCTTCTGTGACGGATCCCGAGGCTATAGATGTAAAAAAGAGAGGCTATATAGACGGTGCTTTAGGGCTAAGGCCAACCATTTTGTCGAACATAACTAAGCGCTTTTCATTAGCGGAAACATTAAAGTCTGAGTACGATAAAACTCTCTCTCTATATGGCTTGTGGGTTTATGACACTATCACAGCTTTGGCCAATGCGGTAGAGAAGACCGGCTTTGTCGTCAATTCTAGTCTCAAGTATAGGAATGGAAGAATAGTTGAGTTTGCAGATATAGGCCCAAAACTTCGCAGAGCAATTATGGATACTGATTTTCAAGGCCTGTCCGGGAAATTCGATTTGAGTCAAGGGCAACTCGGACAATCACAAGTTGTAGTGTACAATGTGAAAGGCCAAAGAGAAAATATCATCGGATATTGGAGACCTGAAACAGGACTTTTTCGAAATTACAGTGTAGATGGTAAACCAGATGGTAAATACAAACTAATGCCGGGTAACACAATGGAGAGACCACCAAAGTTGAAAGTTGGGGTCCCAAACAAAACAATTTTTTCTGAATTTGTTCATGCTAAAGGACAGAATACACCACCTACTGGTTTTGCTGTTGAAGTGTTTAATAAAGTGGTTGATGTTTTGCAACTTCCTTTACCTGAGTTTAATGGTGGTGTTGATGTTATAATCGGAGACATTACAATTTTAGCGGCTCGCACAAACTATGTTGATTTCACAATGCCGTTTTTAGATTCAAGCTTGTCAATGGTGATAAAGGTGAGGTCCGACTCCAAAAGTCAATGGATCCTCCTCAGACCTTTTCATTGGATCCTATGGTTGATTCTTGGTGCAATTTTTGTGGGTGCAACTGGTATTGTAATCATATTGGAAAGAAAAGAAAAGGAAAAAGATGGAAGCAAATTCAAAGAGTATGTCCACAATCCCTTCCTTGTTTACCAGAGCGATATTCAATTTTTGAGAAGTGGGATGTCTAAATGGGTTGTGATAGTGGTCACATTTTTGTTGACCATAGCTGTGCAGGTTTACACAGCAAATTTAACATCAATTTTATCAGAGAGGACAACGGCTAAGCCTTCTCCATGGAAGGACTTGCAAGAGATTAAAAGGAACAATGGATCTTTGGGATATCAAAAAAATTCCTGGGTGGAAGGGTTTCTGAAGAAGCAAATAGGATTTAAGGATGATCAATTAAAGCCTTTAGGAAGTCATGAAAAGTACAATGAGGCATTATCAAATGAAAACAAAACAGAAAAGGTTGATGCTATTTTTGATGAAACTCCTTATCTCATGCTCTTGCTTTCCAGTTGCTCTTCTTGCAAGATGACAGGACCAATCTATAAAACGGGTGGATTTGCCTTTGCATTCCAAAAAAATTCTACTTTGGTCTCGGATTTTTCTGCTGCAATAATACAAGTGACTCAAACTGTGATGACATTTCGTGATATGATGAAGAACATATCCTTACCTGTTACCATTGACAGATCCGAATACAAAAGTGATGTTGAGATCCGGAGTTTGACGATAGACGACTTTGGAGGCCTTTTTCCAATAGTATTGTTTGTTTTGGTTTTCTTCTTAAGCCTTTCAATTCCTAAAATTCCATCCATCACTTTTTGGTTGCATAAGAAATTGGTTTCATTTTGA 2463 0.3926 MQRRRRDCLLLFVALFICLITLTQSATLRRGGGRRRFPVAIPVGVILDLDSSLGSMALNCTNISLQDFYSTNGNYSTKLQLHFRHSGQDLLTSASAAWDLINNQKVHAIVGPQSSEQARFIVELGNKSNVPVIWFSPSGPSLMPTRSRFFIHSESTGSHCSEFEIIAAIIEAYNWQSVIPIYEDPEFGNDLIPCLTYALQDMVTQVPYRIAISQNFTDSQITNELNKIKDKRAYVFLAHMTVELWSRLMKQVKKAGLMSKRYTWILTKGLSSVTDPEAIDVKKRGYIDGALGLRPTILSNITKRFSLAETLKSEYDKTLSLYGLWVYDTITALANAVEKTGFVVNSSLKYRNGRIVEFADIGPKLRRAIMDTDFQGLSGKFDLSQGQLGQSQVVVYNVKGQRENIIGYWRPETGLFRNYSVDGKPDGKYKLMPGNTMERPPKLKVGVPNKTIFSEFVHAKGQNTPPTGFAVEVFNKVVDVLQLPLPEFNGGVDVIIGDITILAARTNYVDFTMPFLDSSLSMVIKVRSDSKSQWILLRPFHWILWLILGAIFVGATGIVIILERKEKEKDGSKFKEYVHNPFLVYQSDIQFLRSGMSKWVVIVVTFLLTIAVQVYTANLTSILSERTTAKPSPWKDLQEIKRNNGSLGYQKNSWVEGFLKKQIGFKDDQLKPLGSHEKYNEALSNENKTEKVDAIFDETPYLMLLLSSCSSCKMTGPIYKTGGFAFAFQKNSTLVSDFSAAIIQVTQTVMTFRDMMKNISLPVTIDRSEYKSDVEIRSLTIDDFGGLFPIVLFVLVFFLSLSIPKIPSITFWLHKKLVSF 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0278 820 Gene3D - 40 161 - -
Acco09g0278 820 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 43 802 IPR015683 -
Acco09g0278 820 SUPERFAMILY Periplasmic binding protein-like II 439 747 - -
Acco09g0278 820 SUPERFAMILY Periplasmic binding protein-like I 41 414 IPR028082 -
Acco09g0278 820 Pfam Receptor family ligand binding region 63 400 IPR001828 -
Acco09g0278 820 Gene3D - 533 663 - -
Acco09g0278 820 Gene3D - 435 532 - -
Acco09g0278 820 Gene3D - 162 335 - -
Acco09g0278 820 Pfam Bacterial extracellular solute-binding proteins, family 3 463 747 IPR001638 -
Acco09g0278 820 SMART GluR_14 444 763 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0278 Acco-ChrAcco09 3342892 3351686 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0278 3 747 Ion Channels AT2G29120 34.820 6.07e-132 415