Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0276 ATGATAACAATGGCAGAGTTGCAGCAAAGCTTCAAAGCTTCAAGTCTTTTTAGTACTGTGGTGTCACTGTTATGGCTTAGCATCATAGCAAGAACTTCCATGGCGGCCACAAGAGAAGTACGAGTAGGAGTGATTCTTGATCTGAATTCAACACTTGGTATAATGGTAAACTACAGCCTCGACTTCGCCGTCCAAGATTACTATTCTGCTCATCAAGATGCGGCCACTAAGATCCACCTTATAGTCCGGAATGTTTCTCAGAACAACGTCCTCGCCGCCGCGTTAGCAGCTATTAATCTAACAATGATTGAAAAAGTGGATGTCATCTTGGGGCCCCAAAATTCAGAGCAAGCAAGGTTTATAGTGGCACTTGGTGAGGCATACCAAAAGCCTGTGATTTGGTTTCCCATAACTGGTCCCTCTCTTTTGCCACCTCCATCACTTCCCTCCATCTACTCCGGTGAAGACCTTAATTGCTTTCAGTTCCAAGCTATAGCCGCCACCATTAAAGCTCTTGGGTGGCAATCAATCGTTCCCATTTATGAAAAGAGTGAATATGGCAGCAACCTTCTTCCATGCCTCGCCGATGTCTTGAAACACTCCGGCATACGAATGGCTAACCTAACTGCCATTGATTCAGATGATAAAATTATTAACAGCACTCTTGACAAGTTAAACAAGATGCGAACCCATGTATTTCTTGTCCATATGAGCATGGATTTCGGAACAACATTTATTAGGTCTGCACAAAAAAAAGATATGATGGGTGAAGGATATGCTTGGATGCTTACCCAAGAGCTATCTTCTCTGACAGATCCTAGAGCTAAGGTTGAGAGAAAATTGTATGATTCCAGAGACATAGGTAAGAAAGATCCCCAGGATCATGGGTATGTGATTGAAAATGTTCCTTTGAAAAGATTCATGCAAGGTGCATTGGGAGTGAGGCCAATGGATTTGAAAAGAACAAATAAACGAAAGGAGAGAGAGAGGAATTTCACTAATCAGTTCAAAAGTCACCTAACTATCTATGGATGGTGGGCTTATCACACAATTGAAGCATTGGCTAAGGCAGTGGAAGAGGCAGGTACAAATGGCACAACACTTCGCGAGAAAATTCTGGAAACTAATTTCACAAGCAATATTTCAGACGTAAGGTTCAATTTAAATCAAGGACAGCTAGATCAATCGGAGTATGAAGTTTACAATGTGATAGGAGATAGAGAAAGGATCATCGGATTTTGGATCCCTAAAAGCGGACTTGTTCAAAATTATACTGAAGAAGGTGGTGGTGGTGATAAGGCATCTGGTGGCCGTAAATACAAACTAAAAGATCCATTGTGGCCGGGTGATACATTGGATAAACCACCAAAGTTGAGGATTGGAGTGCCAAGAACAAGTTCTTTTCCTGAATTTGTGAATGCAGATAATTCTAGTGATGGCTTTGCCATTAATGTGTTCTTAAAAGCTCTTGATGATCTTGATGCTATAATTGGGGACATCACGATCGTGGCAAGTCGGACAAAATGTGTTGATTTCACGTTGCCGTATCTAGATTCAAGTGTAGCAATGGTGGTAAGGGTGAAGGATGCCTCCAAAAGTACAGGGATCCTCTTCAAACCTTTCAATTTGTTGCTATGGTTAATTCTTGGTGGGATATTTGGGGGGGCAACTATTGTCATAATAGTATTAGAAAGAAACAAAGCCAACGGGAGGGAAAAAAACGGAAGGGAAAAAATCGAAGAGTTTCGCTCCAACCCCTTCCTTGTTTACAAGATCGATGGTATGGAGAATTTTGAGAGCAGAGCTGCTGGATGGATGGTAATACTGACGTCATTCCTCTTTATCTTGGTGCTGCAAGTTTACACAGCCAATTTAACATCAATTTTGACACAAGGAAAAGAGAAAGAACCTACATTTAAGAATGAATACGAGATCAATAAAAGTAGCAACTTGCGTGTGGGATATCAAAATGGATCGTGGGTGAGAGAGCTTCTAACTGAACAACTAGGATTCAGCTCGTCTCGGTTAATAGCTTTAACAAGTCGTGAAGAGTACAACTCATCATTGTCAAATGGAACTGAAAAAGGAGGAGTGGATGCTATTTTTGATGAAACTCCTTATCTCACGCTCTTCCTCTCCAGATACAAGTCTCATTTTATGATGACAGGACCAATCTACAAAACTGGTGGATTTGCCTTTGCATTCCCAAGGAAATCTGGCTTGGTCTCGCATTTCTCGAATGCAATCTTAAATGTGACTCAAGATGGGGAGCCATTTCGTTTGCTGATGGCCAAGAGCTCCTTACCCACCTCCATTGAGGATTTGCAATTTGAAGATCAAAATGATATAGAGACTTCAAGTTTGACTATAGCCAACTTTGGAGGAGGCTTTTATCCTGTCCTAGTATCCGTTGTGGCTCTTTTCTTATGCCTTTCCATTCTTAATCCCTCAGTGAGTAAATGGTTGCGGGAGAGGCCTGCCATTCTGAATCAATTGGTGATTAAATGGTTTCGTAATAAGAAGCAGTTTTTCAAGTCAGCTAAGGCTTAA 2550 0.4141 MITMAELQQSFKASSLFSTVVSLLWLSIIARTSMAATREVRVGVILDLNSTLGIMVNYSLDFAVQDYYSAHQDAATKIHLIVRNVSQNNVLAAALAAINLTMIEKVDVILGPQNSEQARFIVALGEAYQKPVIWFPITGPSLLPPPSLPSIYSGEDLNCFQFQAIAATIKALGWQSIVPIYEKSEYGSNLLPCLADVLKHSGIRMANLTAIDSDDKIINSTLDKLNKMRTHVFLVHMSMDFGTTFIRSAQKKDMMGEGYAWMLTQELSSLTDPRAKVERKLYDSRDIGKKDPQDHGYVIENVPLKRFMQGALGVRPMDLKRTNKRKERERNFTNQFKSHLTIYGWWAYHTIEALAKAVEEAGTNGTTLREKILETNFTSNISDVRFNLNQGQLDQSEYEVYNVIGDRERIIGFWIPKSGLVQNYTEEGGGGDKASGGRKYKLKDPLWPGDTLDKPPKLRIGVPRTSSFPEFVNADNSSDGFAINVFLKALDDLDAIIGDITIVASRTKCVDFTLPYLDSSVAMVVRVKDASKSTGILFKPFNLLLWLILGGIFGGATIVIIVLERNKANGREKNGREKIEEFRSNPFLVYKIDGMENFESRAAGWMVILTSFLFILVLQVYTANLTSILTQGKEKEPTFKNEYEINKSSNLRVGYQNGSWVRELLTEQLGFSSSRLIALTSREEYNSSLSNGTEKGGVDAIFDETPYLTLFLSRYKSHFMMTGPIYKTGGFAFAFPRKSGLVSHFSNAILNVTQDGEPFRLLMAKSSLPTSIEDLQFEDQNDIETSSLTIANFGGGFYPVLVSVVALFLCLSILNPSVSKWLRERPAILNQLVIKWFRNKKQFFKSAKA 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0276 849 SUPERFAMILY Periplasmic binding protein-like II 453 757 - -
Acco09g0276 849 Gene3D - 472 535 - -
Acco09g0276 849 Gene3D - 160 360 - -
Acco09g0276 849 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 40 813 IPR015683 -
Acco09g0276 849 SUPERFAMILY Periplasmic binding protein-like I 37 415 IPR028082 -
Acco09g0276 849 Pfam Receptor family ligand binding region 59 405 IPR001828 -
Acco09g0276 849 Gene3D - 536 668 - -
Acco09g0276 849 SMART GluR_14 457 765 IPR001320 GO:0015276|GO:0016020
Acco09g0276 849 Gene3D - 33 155 - -
Acco09g0276 849 Pfam Bacterial extracellular solute-binding proteins, family 3 493 757 IPR001638 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0276 Acco-ChrAcco09 3306831 3312550 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0276 37 844 Ion Channels AT2G29120 31.680 2.83e-107 350