Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0272 ATGGAGCCTTTGATACTTGATGATCCCTCTTCCTCATTCTATGATTGCATAAACTCAACTTTTGATCAACTTGAGTCTTTTTACTTCAACTTAGACACTCCTTTTTTCACTGCTTCAGAGGATACTTCTTCAGATATTGTCCAATTCCCTTCCACCATCTTCTCCGATGACCATATCTATTGTCCAATTGATGAGGACAACTTTGAATTCCCATCTTTAATGGAAGATTTCTCCATGGATCTCGACTTCGATCAGGTTTTGAGTTCTCAAAGTCTGGTGAGTATCCATGGATACCCACAAGAAAGTGAGGGAATAATAAGCTTTTCTTCGCAGAACTTGTGTTCTGATACAGAACATGGTTGGAGTCCAACACAGTCTATTCAATCAGACATGTCTACAGTAGTACATGCACAACCACCATCACTGATCATCCCAGAACAGAACATGGAGAGGGAGAACCAGTTCAGTCTTCCTCATCTTCTAGAAGCCATTGGAGAAGCCTTAGAGCAAGGACATAACACACTTTCACAAGTGATTCTGAAACACATCAGACACAAAGTAATCAGACACAAAGTAAGTCCTCTTGGTGATCCTCTTGAACGTTTGGCCTTCAATTTGTCCCAAAATCATGATCCTACAGAACATGGGACTTTCATCAAACAGGAGGCGCGCAAGAGCTTCAACAAAGCTTTCAAAGCTATCTACCAAGGCCTCCCACATGGAAGAATTGCTCATTTTGCAGCCAATTCAGCAATTCTAGGATCTCTTCCAGAGGATTCAGAGGTCATTGATATAATAGACTTTGATATGGGAGTAGGCGTTCAATGGCCTCCTTTAATGGAGGTTATTGCTCAACACCACGAAACATTGAAACTCACTGCAATTAGATTGGAAGAAGATGAAAGTTCAGATCTTCATTGGGTTTCTAAACCGAAATTTGAAGAAATCAGGAGGAACCTCCATGAGCAGGCCAAATCGTGTGGCTTGAAGTTGAAGGTGGAGGAACAGAGTATAGAAGAAATGGTGACAGAGGTCAAGAAATTGAACAAAAGAGGTGGAAACGGAAATGGAAAGAGAAATTTCGTGGCTTTCAATTGCATGGTGGGTCTCCCGCATGTGGGTAGGGTTAGAAGCAGAAGCCATGTATTGGAATTCCTGAGGGTAGCAAGGGACTTCATCAAAAGCTCACCTTCAAACAAGGGAATTATAACTTTTGGTGATGGAGAAGCATGTGAGAAACTGAGAGACAGCACAAACTTCATCTCATTCTTTAATGGCCATTTGGTGCATTACCATGCTTTATTAGAATCCATGGAATCTAATTTCCCATTCCAATTCTCAGAGGCAAGAACAGCAATTGAGAATCTATTTGTCGCGCCTTATATATCAAGTGATGATTGGTTTCAGAAGTGGGAGCATATGAGACAATACCAGAAAGTTCAATCAGAAACAGAATTGCAGGGTCGAAGTATGAGGGACGAGACATTAATGGAAGTTGGAGAAATGCTTAGAGGAATCGAAGGGTCGTATGAAGTTAAGATTGAAGGGAACAATGGAAACGAAATGGTTCTGCAATGGAAAGGAACGCAACTTCTGAGAATTTCAACTTGGGCAACTTAA 1620 0.4117 MEPLILDDPSSSFYDCINSTFDQLESFYFNLDTPFFTASEDTSSDIVQFPSTIFSDDHIYCPIDEDNFEFPSLMEDFSMDLDFDQVLSSQSLVSIHGYPQESEGIISFSSQNLCSDTEHGWSPTQSIQSDMSTVVHAQPPSLIIPEQNMERENQFSLPHLLEAIGEALEQGHNTLSQVILKHIRHKVIRHKVSPLGDPLERLAFNLSQNHDPTEHGTFIKQEARKSFNKAFKAIYQGLPHGRIAHFAANSAILGSLPEDSEVIDIIDFDMGVGVQWPPLMEVIAQHHETLKLTAIRLEEDESSDLHWVSKPKFEEIRRNLHEQAKSCGLKLKVEEQSIEEMVTEVKKLNKRGGNGNGKRNFVAFNCMVGLPHVGRVRSRSHVLEFLRVARDFIKSSPSNKGIITFGDGEACEKLRDSTNFISFFNGHLVHYHALLESMESNFPFQFSEARTAIENLFVAPYISSDDWFQKWEHMRQYQKVQSETELQGRSMRDETLMEVGEMLRGIEGSYEVKIEGNNGNEMVLQWKGTQLLRISTWAT 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0272 539 ProSiteProfiles GRAS family profile. 148 538 IPR005202 -
Acco09g0272 539 Pfam GRAS domain family 159 537 IPR005202 -
Acco09g0272 539 Coils Coil 331 351 - -
Acco09g0272 539 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 139 508 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0272 Acco-ChrAcco09 3259548 3261167 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0272 145 537 GRAS Transcription Factor Family AT5G66770 25.301 2.57e-14 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Acco09g0272 GRAS 3.7e-33 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g0272 09 3259548 3261167 Acco09g0272 09 3259548 3261167 ECH