Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0267 ATGGAAGGAAGAAAGGAAGGCTCGGAATGCTCGAAAACGAGCCCTTCTAGTTATGATAATTGTGACAAATTAGATGAAGCGTGCGCGAGCAAGAGCAAGACCAATGAAGACGAAGAAGAAGAAGGTAAGAAGAATATTATAGATAATATTAATGGAGGAAGCTCAAGCAATAGCACGGTGGAAGAGACGACGGAGAAGAAGCCGCTGGTGAGGCCTTATGTGAGATCCAAGATGCCAAGGCTCCGATGGACTCCGGATCTTCATCTTCGCTTTGTTCATGCCGTTCAAAGGCTTGGAGGAGAAGAAAGAGCAACACCAAAGTTGGTTCTCCAATTAATGAACATCAAAGGCTTGAGTATAGCTCATGTGAAGAGTCATCTACAGATGTATAGGAGCAAGAAGGTAGATGATCCAAGTCAAGTATTGACTGATCATAGGCACCTTGTAGAAAGTGGAGACAGAAATATGTACAGTCTCAGCCAAATTCCCATGCTCCAAGGTTATAATCCATGCCAAACTTCAGCCTTCAGATATGGATATGGGGATGCCTCTTTGAGTGTGTATGACAAAATCGTTCATAGCCCTTTCAATATGGGTCGAAGTCTGAATATGGATCATGATTCCGGGTCATCCGGTGGGTTTCACAACACTTTCCAGGTGGATCCTTCAAATTTTCTGAAGCAATCACCAGCAACAAACAAAATCTATGAGACAAAAGAAAATCAAATCCTATCATTTAGTGGCCATCATCATCATGAACCCATATACAATATTGGAACCAGGTTGAGCCTTCAGAATAATAACAGTTCTGATCTTAACTACTCATTGACCCATATAGGACCAACAATAAGATCAGAAGAACAGTTTCTTCCTTTTATGAAGGATCATGATGATCAAACAAAGACAATGTCGACGCTGAAAAGAAAGACTTGTGATTCTGATCATAATAATAACCGCCACCTTGATCTGGATCTATCGCTCAAGTTAAGTTCTAGGGTTGATATTGATAGTGCACAGAAGAATCGTCATGAAGAAAGGAATAACTTGGAGGAGAGTCATGAAGAAGATGATCGAAATCTCTCACTGTCTTTGTATTCTCAAATTTCATCGTTTTCTGATACTAATAATAATTATGCTAGGAGCAGCTTCAAGGAAGGTGAACACAGTGATTGTAAGGAGAGATCAAGGAGGGAAAAGGCTAGTACACTGGATCTGACTATATGA 1224 0.406 MEGRKEGSECSKTSPSSYDNCDKLDEACASKSKTNEDEEEEGKKNIIDNINGGSSSNSTVEETTEKKPLVRPYVRSKMPRLRWTPDLHLRFVHAVQRLGGEERATPKLVLQLMNIKGLSIAHVKSHLQMYRSKKVDDPSQVLTDHRHLVESGDRNMYSLSQIPMLQGYNPCQTSAFRYGYGDASLSVYDKIVHSPFNMGRSLNMDHDSGSSGGFHNTFQVDPSNFLKQSPATNKIYETKENQILSFSGHHHHEPIYNIGTRLSLQNNNSSDLNYSLTHIGPTIRSEEQFLPFMKDHDDQTKTMSTLKRKTCDSDHNNNRHLDLDLSLKLSSRVDIDSAQKNRHEERNNLEESHEEDDRNLSLSLYSQISSFSDTNNNYARSSFKEGEHSDCKERSRREKASTLDLTI 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0267 407 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 59 297 IPR046955 GO:0003700
Acco09g0267 407 Gene3D - 78 135 - -
Acco09g0267 407 Coils Coil 21 41 - -
Acco09g0267 407 MobiDBLite consensus disorder prediction 337 359 - -
Acco09g0267 407 MobiDBLite consensus disorder prediction 379 407 - -
Acco09g0267 407 MobiDBLite consensus disorder prediction 48 63 - -
Acco09g0267 407 Coils Coil 335 355 - -
Acco09g0267 407 MobiDBLite consensus disorder prediction 1 68 - -
Acco09g0267 407 MobiDBLite consensus disorder prediction 24 46 - -
Acco09g0267 407 NCBIfam myb-like DNA-binding domain, SHAQKYF class 79 134 IPR006447 GO:0003677
Acco09g0267 407 FunFam Myb family transcription factor 77 135 - -
Acco09g0267 407 Pfam Myb-like DNA-binding domain 81 131 IPR001005 -
Acco09g0267 407 SUPERFAMILY Homeodomain-like 77 133 IPR009057 -
Acco09g0267 407 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 75 135 IPR017930 -
Acco09g0267 407 MobiDBLite consensus disorder prediction 383 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0267 Acco-ChrAcco09 3118286 3120042 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0267 70 140 G2-like Transcription Factor Family AT2G42660 78.873 1.76e-33 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Acco09g0267 Myb_DNA-binding 1.9e-07 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g0267 09 3118286 3120042 Acco09g0267 09 3118286 3120042 ECH