Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0232 ATGGATCAGATTCATCTTCATCACCATCTTCTTCCTCCACAGCATCATCATAATCTTCCTCAGCCTCAACCTCAGCCTCTTGGTGGTATTACCATGAACGTGGATGTGAGTAGCAGCGGTGTCGGTGGTGTCTCCGCCGCCGCAGCCGTGGACAGGTTGCCACAGTGGAGCGTGCAAGAGACAAAGGAGTTTCTGGGGATTAGAGCAGAACTAGATAAGAATTTCATGGAGACAAAGAGGAACAAGCAGCTATGGCAACTTATATCTAACGCCATGGCCGATAAGGGTTACTTTCGTAGCCCTGAACAGTGCAAGTGCAAGTGGAAAAACCTCTTCACCAGGTACAAGGGATGTGAAACAGCAGAGCCAGAAAGTGTAAGGCAACAATTCCCATTTTACAAGGAGCTCGAAGCGATTTTCACAGCGAGGATGCAGAGAATGGTGTGGACGGAGGCCGAAGGAGGAGCGAAGAAGAACATGGCCACGGCAGCCACGGCCGGAAACGTGTCGTCGGAAGATGAAGACGAGGACGGAAACAACAACAACGAAGAGATAAGCACGGATAATCATCAGGGAGAGATGAGGACGAGGAAGAAGATGAAGAGATCAAGCAAAAGTTACAGCAGCAGCAAGAAGCTGAAGGAGATACTGGAAGAGTTCATGAAACAACAGATAGAGATAGAGACACAGTGGATGGAAGCTTTTAGAGAGAGAGAGAAAGAGAGAAGGATGAGAGAGATGGAATGGAGGGAAGCCATGGAAGCTCTGGAGAATGAGAGGATGATGATGGAGCAAAGATGGAGGGAGAGAGAAGAAGAGAGAAGAGTTAGAGAAGAAGCTAGGGCTGAGAGAAGAGACGCTTTAATCACTTCTCTTCTTAACAAGATCATCTCAAGACCTGAAATTTAG 909 0.4774 MDQIHLHHHLLPPQHHHNLPQPQPQPLGGITMNVDVSSSGVGGVSAAAAVDRLPQWSVQETKEFLGIRAELDKNFMETKRNKQLWQLISNAMADKGYFRSPEQCKCKWKNLFTRYKGCETAEPESVRQQFPFYKELEAIFTARMQRMVWTEAEGGAKKNMATAATAGNVSSEDEDEDGNNNNEEISTDNHQGEMRTRKKMKRSSKSYSSSKKLKEILEEFMKQQIEIETQWMEAFREREKERRMREMEWREAMEALENERMMMEQRWREREEERRVREEARAERRDALITSLLNKIISRPEI 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0232 302 FunFam Zinc finger and SCAN domain-containing 20 56 117 - -
Acco09g0232 302 CDD GT1 54 119 - -
Acco09g0232 302 Gene3D - 56 117 - -
Acco09g0232 302 ProSiteProfiles Myb-like domain profile. 56 112 IPR001005 -
Acco09g0232 302 Pfam Myb/SANT-like DNA-binding domain 55 139 IPR044822 -
Acco09g0232 302 Coils Coil 246 273 - -
Acco09g0232 302 PANTHER FI21293P1 35 298 - -
Acco09g0232 302 MobiDBLite consensus disorder prediction 162 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0232 Acco-ChrAcco09 2708502 2710791 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0232 44 296 Trihelix Transcription Factor Family AT2G38250 54.510 2.58e-66 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Acco09g0232 Myb_DNA-bind_4 5.2e-20 CL0123