Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0214 ATGACTACTGTTCAACAGGAGGCATTGATCTTGGAGAATGGCCACGCCAAGTGTTTGAGCAGTGAGATGAGGCATGGAAGGACTGCTCATAACATGTCTTCTTCTTCCTTGCGCAAGAAATCTGACCTAACCCTTGTTTCCAAGGTTAAATGGTGTTTTCTCAGGAATTTGCTCCTCAATTTCCAGGAGGTCATTCTTGGCACCAAGTTGTCCATTATCTTTCTCGTGATTCCATTTGCTATCGTCGCAGAAGTCTACAGGTTCGGTCGACCTTGGGTTTTTGCGTTTAGCTTACTTGGCCTTGCACCACTAGCTGAACGCGTCAGCTTCTTGACAGAACAAGTTGCTTATCACACGGGTCCAACAGTTGGAGGACTCTTAAATGCAACATTTGGCAATATCACAGAACTTATAATAGCAATATTTGCTCTCAGAAATTATAAAATTGCTGTGCTTAAGTATTCTCTCTTGGGTTCAATCCTTTCAAACATTCTTTTAGTTCTTGGAACCTCTATCTTCAGTGGTGGAATAGTAAACATCAGAGGAGGACAAAAATTTGATAGGAGACAGGCAGATGTGAACTCACTTATGCTGTTGCTGGCATTATCGTGCCACTTGCTGCCTTTGTTGTTCAAATATGCTGACATCTCACCTGCTCTTGATACAGACGCACCTCTCCACTTGTCAAGAGCTGCAAGTATTGTGATGCTGATAACATATTTTGCTTACCTTGTCTTCCAACTTTGGACCCATCGCCAGTTATTTGAAGCTGAGGATGAAGAAGATGATAATGATAATGTTGCAGAAACAGCTGTGATAGGATTTTGGAGTGGGATTGCCTGGCTTGCTGGAATGACTGTACTCATTGCTATCTTGTCTCAATTTGTGGTGGACACAATTGAGGGTGCTTCAGATTCATGGAACCTCTCTGTCAGCTTCCTTAGCATCATCGTTTTGCCAATGCTTGGCAATGCAACTGAACATGGAGGAGCAACCATATTTGCTTTGAAGAACAAGCTAGACATCTCATTGGGTGTTGCTTTAGGTTCCGCAGTTCAGGTTTCCATGTTTGTGGTTCCCCTGTGCGTGGTTCTGGCTTGGATAATGGGTATCAGAATGGACCTTGATTTCAATCTCCTGGAGACTGGTTCTCTTGCTTTGGCTATTTTAGTCGTATCCTTCACTTTGCAGGATGGGACTTCTCACTACATGAAAGGCCTTGTTCTCCTGTTCTGCTACGTTGTTATTGGAGCATGCTTTTTTGTGCAAAGAACACCACTCAACCAAGCTGATGTTCCAAACACGATTAAATCCGCAACTGAAGCTTCTCTGAGAGCTTAG 1341 0.4333 MTTVQQEALILENGHAKCLSSEMRHGRTAHNMSSSSLRKKSDLTLVSKVKWCFLRNLLLNFQEVILGTKLSIIFLVIPFAIVAEVYRFGRPWVFAFSLLGLAPLAERVSFLTEQVAYHTGPTVGGLLNATFGNITELIIAIFALRNYKIAVLKYSLLGSILSNILLVLGTSIFSGGIVNIRGGQKFDRRQADVNSLMLLLALSCHLLPLLFKYADISPALDTDAPLHLSRAASIVMLITYFAYLVFQLWTHRQLFEAEDEEDDNDNVAETAVIGFWSGIAWLAGMTVLIAILSQFVVDTIEGASDSWNLSVSFLSIIVLPMLGNATEHGGATIFALKNKLDISLGVALGSAVQVSMFVVPLCVVLAWIMGIRMDLDFNLLETGSLALAILVVSFTLQDGTSHYMKGLVLLFCYVVIGACFFVQRTPLNQADVPNTIKSATEASLRA 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0214 446 NCBIfam calcium/proton exchanger 56 421 - -
Acco09g0214 446 Gene3D - 264 421 IPR044880 -
Acco09g0214 446 Gene3D - 121 262 IPR044880 -
Acco09g0214 446 NCBIfam calcium/proton exchanger 75 421 IPR004798 GO:0006816|GO:0015369
Acco09g0214 446 FunFam Vacuolar cation/proton exchanger 265 422 - -
Acco09g0214 446 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 21 425 IPR004713 GO:0006812|GO:0008324|GO:0016020
Acco09g0214 446 Pfam Sodium/calcium exchanger protein 279 416 IPR004837 GO:0016020|GO:0055085
Acco09g0214 446 Pfam Sodium/calcium exchanger protein 92 249 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0214 Acco-ChrAcco09 2476188 2479523 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0214 10 429 Antiporters AT2G38170 65.268 0.0 542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g0214 09 2476188 2479523 Acco07g2033 07 38036105 38042381 CCT
Acco09g0214 09 2476188 2479523 Acco09g0214 09 2476188 2479523 ECH